RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 DZIP3Q86Y13 1208 aaKnown RBP13.44□□□□□ -0.26
CCND1-201ENST00000227507 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
CCND1-201ENST00000227507 TMX1Q9H3N1 280 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 TECPR2O15040 1411 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
CCND1-201ENST00000227507 ERCC4Q92889 916 aaPredicted RBP13.44□□□□□ -0.26
CCND1-201ENST00000227507 CCNL1Q9UK58 526 aaPredicted RBP13.44□□□□□ -0.26
CCND1-201ENST00000227507 ANKRD18BA2A2Z9 1011 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 HIP1O00291 1037 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 ZNF75DP51815 510 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 SF3A1Q15459 793 aaKnown RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 TMED8Q6PL24 325 aaPredicted RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 CCDC73Q6ZRK6 1079 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 RPGRQ92834 1020 aaKnown RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 IL25Q9H293 177 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 CDK12Q9NYV4 1490 aaPredicted RBP13.43□□□□□ -0.26
CCND1-201ENST00000227507 PDCP20941 246 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 LINS1Q8NG48 757 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 ANKRD7Q92527 254 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
CCND1-201ENST00000227507 HSPA4P34932 840 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 CDC37L1Q7L3B6 337 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 MTMR6Q9Y217 621 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 CHRM1P11229 460 aaPredicted RBP13.42□□□□□ -0.26
CCND1-201ENST00000227507 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.26
CCND1-201ENST00000227507 MRVI1Q9Y6F6 885 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
CCND1-201ENST00000227507 ZNF496Q96IT1 587 aaPredicted RBP13.42□□□□□ -0.26
CCND1-201ENST00000227507 DDX41Q9UJV9 622 aaKnown RBP13.42□□□□□ -0.26
CCND1-201ENST00000227507 DIP2AQ14689 1571 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 KIAA1210Q9ULL0 1709 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 KINO60870 393 aaKnown RBP13.41□□□□□ -0.26
CCND1-201ENST00000227507 TERF2Q15554 542 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 SYNE3Q6ZMZ3 975 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 UBXN4Q92575 508 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
CCND1-201ENST00000227507 NIP7Q9Y221 180 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCND1-201ENST00000227507 IFIT1P09914 478 aaKnown RBP13.41□□□□□ -0.26
CCND1-201ENST00000227507 ERCC6LQ2NKX8 1250 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 NBPF14Q5TI25 921 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 BLOC1S2Q6QNY1 142 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 SCAND2PQ9GZW5 306 aaPredicted RBP13.41□□□□□ -0.26
CCND1-201ENST00000227507 ARGLU1Q9NWB6 273 aaPredicted RBP13.41□□□□□ -0.26
CCND1-201ENST00000227507 USP31Q70CQ4 1352 aa13.41□□□□□ -0.26
CCND1-201ENST00000227507 GNPATO15228 680 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 GUCY1B3Q02153 619 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 ZSCAN31Q96LW9 406 aaPredicted RBP13.4□□□□□ -0.26
CCND1-201ENST00000227507 USP27XA6NNY8 438 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 GRM8O00222 908 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
CCND1-201ENST00000227507 ME1P48163 572 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 FKBP4Q02790 459 aaKnown RBP eCLIP13.4□□□□□ -0.262e-6■■■■□ 21.4
CCND1-201ENST00000227507 KMT5BQ4FZB7 885 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
CCND1-201ENST00000227507 DDX46Q7L014 1031 aaKnown RBP13.4□□□□□ -0.26
CCND1-201ENST00000227507 DNAJC10Q8IXB1 793 aa13.4□□□□□ -0.26
CCND1-201ENST00000227507 URI1O94763 535 aaPredicted RBP13.4□□□□□ -0.27
CCND1-201ENST00000227507 ATP8B2P98198 1209 aa13.4□□□□□ -0.27
CCND1-201ENST00000227507 SNW1Q13573 536 aaKnown RBP13.4□□□□□ -0.27
CCND1-201ENST00000227507 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.27
CCND1-201ENST00000227507 ISM2Q6H9L7 571 aa13.4□□□□□ -0.27
CCND1-201ENST00000227507 FBXO38Q6PIJ6 1188 aa13.4□□□□□ -0.27
CCND1-201ENST00000227507 LDHAL6AQ6ZMR3 332 aa13.4□□□□□ -0.27
CCND1-201ENST00000227507 RHPN1Q8TCX5 695 aa13.4□□□□□ -0.27
CCND1-201ENST00000227507 DDX19AQ9NUU7 478 aaKnown RBP13.4□□□□□ -0.27
CCND1-201ENST00000227507 BIN1O00499 593 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 NR1I2O75469 434 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 ST5P78524 1137 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 ARHGAP29Q52LW3 1261 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 TMCO3Q6UWJ1 677 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 RALYLQ86SE5 291 aaKnown RBP13.39□□□□□ -0.27
CCND1-201ENST00000227507 RGS12O14924 1447 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
CCND1-201ENST00000227507 SLIT1O75093 1534 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 CLGNO14967 610 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 SGSM2O43147 1006 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 CCDC144BQ3MJ40 725 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 CCDC144CPQ8IYA2 1237 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 JCADQ9P266 1359 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
CCND1-201ENST00000227507 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
CCND1-201ENST00000227507 ME3Q16798 604 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 PHAXQ9H814 394 aaKnown RBP13.38□□□□□ -0.27
CCND1-201ENST00000227507 SH2B1Q9NRF2 756 aaPredicted RBP13.38□□□□□ -0.27
CCND1-201ENST00000227507 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
CCND1-201ENST00000227507 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
CCND1-201ENST00000227507 GPS2Q13227 327 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms