RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 NFATC2IPQ8NCF5 419 aa16.54■□□□□ 0.24
SF1-201ENST00000227503 CYP46A1Q9Y6A2 500 aa16.54■□□□□ 0.24
SF1-201ENST00000227503 PRAMEF22A3QJZ6 481 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 PNMA6AP0CW24 399 aaPredicted RBP16.53■□□□□ 0.24
SF1-201ENST00000227503 GYS2P54840 703 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 CWF19L2Q2TBE0 894 aaKnown RBP16.53■□□□□ 0.24
SF1-201ENST00000227503 ARHGAP29Q52LW3 1261 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.53■□□□□ 0.24
SF1-201ENST00000227503 TRIM66O15016 1216 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 ARHGEF25Q86VW2 580 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
SF1-201ENST00000227503 IQCB1Q15051 598 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 CHMP4CQ96CF2 233 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 KAZALD1Q96I82 304 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 JAK2O60674 1132 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 C1orf141Q5JVX7 400 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 ZSWIM6Q9HCJ5 1215 aa16.52■□□□□ 0.24
SF1-201ENST00000227503 GCP02774 474 aa16.52■□□□□ 0.23
SF1-201ENST00000227503 BMS1Q14692 1282 aaKnown RBP16.52■□□□□ 0.23
SF1-201ENST00000227503 VPS53Q5VIR6 699 aa16.52■□□□□ 0.23
SF1-201ENST00000227503 TM6SF1Q9BZW5 370 aa16.52■□□□□ 0.23
SF1-201ENST00000227503 LCMT1Q9UIC8 334 aa16.52■□□□□ 0.23
SF1-201ENST00000227503 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.23
SF1-201ENST00000227503 UTYO14607 1347 aa16.51■□□□□ 0.23
SF1-201ENST00000227503 SNW1Q13573 536 aaKnown RBP16.51■□□□□ 0.23
SF1-201ENST00000227503 EVI5LQ96CN4 794 aa16.51■□□□□ 0.23
SF1-201ENST00000227503 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
SF1-201ENST00000227503 NECTIN1Q15223 517 aa16.51■□□□□ 0.23
SF1-201ENST00000227503 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
SF1-201ENST00000227503 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
SF1-201ENST00000227503 DDX19AQ9NUU7 478 aaKnown RBP16.51■□□□□ 0.23
SF1-201ENST00000227503 BECN2A8MW95 431 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 SASH1O94885 1247 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 PTPN21Q16825 1174 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 KRBA2Q6ZNG9 492 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 AACSQ86V21 672 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 C10orf67Q8IYJ2 551 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 LINS1Q8NG48 757 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 CCDC34Q96HJ3 373 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 HDAC5Q9UQL6 1122 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 SLIT3O75094 1523 aa16.5■□□□□ 0.23
SF1-201ENST00000227503 GRM8O00222 908 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 E4F1Q66K89 784 aaPredicted RBP16.49■□□□□ 0.23
SF1-201ENST00000227503 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 ANKRD24Q8TF21 1146 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 AOPEPQ8N6M6 819 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
SF1-201ENST00000227503 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 RSPH14Q9UHP6 348 aa16.49■□□□□ 0.23
SF1-201ENST00000227503 PDIA6Q15084 440 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 RBM43Q6ZSC3 357 aaKnown RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 BICC1Q9H694 974 aaKnown RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 ELP1O95163 1332 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 ZSCAN31Q96LW9 406 aaPredicted RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 SH2B1Q9NRF2 756 aaPredicted RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 PPP1R13BQ96KQ4 1090 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 SCAND2PQ9GZW5 306 aaPredicted RBP16.48■□□□□ 0.23
SF1-201ENST00000227503 DDX21Q9NR30 783 aaKnown RBP eCLIP16.48■□□□□ 0.23
SF1-201ENST00000227503 SNRKQ9NRH2 765 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
SF1-201ENST00000227503 CAMTA1Q9Y6Y1 1673 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 SLC20A2Q08357 652 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 DHX40Q8IX18 779 aaKnown RBP16.47■□□□□ 0.23
SF1-201ENST00000227503 FAM177A1Q8N128 213 aaPredicted RBP16.47■□□□□ 0.23
SF1-201ENST00000227503 MAP4K1Q92918 833 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
SF1-201ENST00000227503 SLFNL1Q499Z3 407 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 CREB3L3Q68CJ9 461 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
SF1-201ENST00000227503 TLR7Q9NYK1 1049 aaKnown RBP16.46■□□□□ 0.23
SF1-201ENST00000227503 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 IGKV5-2P06315 115 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 CDC25BP30305 580 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 G3BP1Q13283 466 aaKnown RBP eCLIP16.46■□□□□ 0.235e-7■□□□□ 9.3
SF1-201ENST00000227503 NBPF11Q86T75 865 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 MRFAP1L1Q96HT8 127 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 CCDC8Q9H0W5 538 aaPredicted RBP16.46■□□□□ 0.23
SF1-201ENST00000227503 DNAI1Q9UI46 699 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.46■□□□□ 0.231e-8■□□□□ 11.3
SF1-201ENST00000227503 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
SF1-201ENST00000227503 SASH3O75995 380 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 GOLGA8FQ08AF8 430 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 GOLGA8DPQ0D2H9 430 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 HIP1O00291 1037 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SF1-201ENST00000227503 ZKSCAN1P17029 563 aaPredicted RBP16.45■□□□□ 0.22
SF1-201ENST00000227503 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
SF1-201ENST00000227503 TMC6Q7Z403 805 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 BRF1Q92994 677 aa16.45■□□□□ 0.22
SF1-201ENST00000227503 FANCGO15287 622 aa16.44■□□□□ 0.22
SF1-201ENST00000227503 SMC2O95347 1197 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms