RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
SEC61B-201ENST00000223641 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
SEC61B-201ENST00000223641 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
SEC61B-201ENST00000223641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.36■□□□□ 0.37
SEC61B-201ENST00000223641 CHRNA5P30532 468 aa17.35■□□□□ 0.37
SEC61B-201ENST00000223641 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
SEC61B-201ENST00000223641 GPR108Q9NPR9 543 aa17.35■□□□□ 0.37
SEC61B-201ENST00000223641 MROH5Q6ZUA9 1318 aa17.35■□□□□ 0.37
SEC61B-201ENST00000223641 CACNA1SQ13698 1873 aa17.35■□□□□ 0.37
SEC61B-201ENST00000223641 TFCP2Q12800 502 aa17.34■□□□□ 0.37
SEC61B-201ENST00000223641 OS9Q13438 667 aaPredicted RBP17.34■□□□□ 0.37
SEC61B-201ENST00000223641 MINPP1Q9UNW1 487 aa17.34■□□□□ 0.37
SEC61B-201ENST00000223641 SLX4Q8IY92 1834 aa17.33■□□□□ 0.37
SEC61B-201ENST00000223641 SMARCA5O60264 1052 aaPredicted RBP17.33■□□□□ 0.36
SEC61B-201ENST00000223641 PDE8BO95263 885 aa17.33■□□□□ 0.36
SEC61B-201ENST00000223641 DPEP1P16444 411 aa17.33■□□□□ 0.36
SEC61B-201ENST00000223641 CNKSR1Q969H4 720 aa17.33■□□□□ 0.36
SEC61B-201ENST00000223641 CEP126Q9P2H0 1117 aa17.33■□□□□ 0.36
SEC61B-201ENST00000223641 LTBP1Q14766 1721 aa17.33■□□□□ 0.36
SEC61B-201ENST00000223641 APBB1O00213 710 aa17.32■□□□□ 0.36
SEC61B-201ENST00000223641 CHRNDQ07001 517 aa17.32■□□□□ 0.36
SEC61B-201ENST00000223641 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
SEC61B-201ENST00000223641 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEC61B-201ENST00000223641 LNPKQ9C0E8 428 aa17.32■□□□□ 0.36
SEC61B-201ENST00000223641 SALL3Q9BXA9 1300 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 METTL24Q5JXM2 366 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
SEC61B-201ENST00000223641 C7orf43Q8WVR3 580 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 EAF2Q96CJ1 260 aaPredicted RBP17.31■□□□□ 0.36
SEC61B-201ENST00000223641 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
SEC61B-201ENST00000223641 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
SEC61B-201ENST00000223641 FGFR2P21802 821 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 PDE4AP27815 886 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 TNNI3KQ59H18 835 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 PRPF40BQ6NWY9 871 aaKnown RBP17.3■□□□□ 0.36
SEC61B-201ENST00000223641 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 AKAP2Q9Y2D5 859 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 FPGT-TNNI3KV9GXZ4 949 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 ZNF609O15014 1411 aa17.3■□□□□ 0.36
SEC61B-201ENST00000223641 C16orf71Q8IYS4 520 aaPredicted RBP17.29■□□□□ 0.36
SEC61B-201ENST00000223641 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
SEC61B-201ENST00000223641 PODXL2Q9NZ53 605 aa17.29■□□□□ 0.36
SEC61B-201ENST00000223641 SNED1Q8TER0 1413 aa17.29■□□□□ 0.36
SEC61B-201ENST00000223641 TAF5LO75529 589 aa17.28■□□□□ 0.36
SEC61B-201ENST00000223641 UBE4AQ14139 1066 aa17.28■□□□□ 0.36
SEC61B-201ENST00000223641 SLC51AQ86UW1 340 aa17.28■□□□□ 0.36
SEC61B-201ENST00000223641 HELBQ8NG08 1087 aaPredicted RBP17.28■□□□□ 0.36
SEC61B-201ENST00000223641 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
SEC61B-201ENST00000223641 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
SEC61B-201ENST00000223641 XDHP47989 1333 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 A0A1B0GUL7 405 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 TIMM10P62072 90 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 PUM3Q15397 648 aaKnown RBP17.27■□□□□ 0.36
SEC61B-201ENST00000223641 CC2D2BQ6DHV5 1058 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 LPIN2Q92539 896 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 FHDC1Q9C0D6 1143 aaPredicted RBP17.27■□□□□ 0.36
SEC61B-201ENST00000223641 OSBPL3Q9H4L5 887 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 LEMD3Q9Y2U8 911 aa17.27■□□□□ 0.36
SEC61B-201ENST00000223641 GPSM2P81274 684 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 AACSQ86V21 672 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 PLEKHM2Q8IWE5 1019 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 NLGN2Q8NFZ4 835 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
SEC61B-201ENST00000223641 PPP1R1BQ9UD71 204 aaPredicted RBP17.26■□□□□ 0.35
SEC61B-201ENST00000223641 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
SEC61B-201ENST00000223641 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
SEC61B-201ENST00000223641 IRS2Q9Y4H2 1338 aa17.25■□□□□ 0.35
SEC61B-201ENST00000223641 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
SEC61B-201ENST00000223641 WTIPA6NIX2 430 aaPredicted RBP17.25■□□□□ 0.35
SEC61B-201ENST00000223641 SNAP23O00161 211 aa17.25■□□□□ 0.35
SEC61B-201ENST00000223641 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
SEC61B-201ENST00000223641 CCDC8Q9H0W5 538 aaPredicted RBP17.25■□□□□ 0.35
SEC61B-201ENST00000223641 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
SEC61B-201ENST00000223641 IFIT2P09913 472 aaKnown RBP17.24■□□□□ 0.35
SEC61B-201ENST00000223641 PDE1AP54750 535 aa17.24■□□□□ 0.35
SEC61B-201ENST00000223641 GRIPAP1Q4V328 841 aa17.24■□□□□ 0.35
SEC61B-201ENST00000223641 OLFM4Q6UX06 510 aa17.24■□□□□ 0.35
SEC61B-201ENST00000223641 C15orf52Q6ZUT6 534 aaKnown RBP17.24■□□□□ 0.35
SEC61B-201ENST00000223641 SYT17Q9BSW7 474 aa17.24■□□□□ 0.35
SEC61B-201ENST00000223641 TLR7Q9NYK1 1049 aaKnown RBP17.24■□□□□ 0.35
SEC61B-201ENST00000223641 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
SEC61B-201ENST00000223641 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 ZBTB22O15209 634 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 IFIT1P09914 478 aaKnown RBP17.23■□□□□ 0.35
SEC61B-201ENST00000223641 MX1P20591 662 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 ATP2B4P23634 1241 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
SEC61B-201ENST00000223641 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 DBNDD2Q9BQY9 259 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 RTFDC1Q9BY42 306 aaPredicted RBP17.23■□□□□ 0.35
SEC61B-201ENST00000223641 ANKIB1Q9P2G1 1089 aa17.23■□□□□ 0.35
SEC61B-201ENST00000223641 AOX1Q06278 1338 aa17.22■□□□□ 0.35
SEC61B-201ENST00000223641 SLC5A1P13866 664 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms