RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 ANTXR1Q9H6X2 564 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 PNPLA6Q8IY17 1366 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 CCDC152Q4G0S7 254 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 RBM27Q9P2N5 1060 aaKnown RBP13.29□□□□□ -0.28
NOD1-201ENST00000222823 PA2G4Q9UQ80 394 aaKnown RBP13.29□□□□□ -0.28
NOD1-201ENST00000222823 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 CAVIN2O95810 425 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 CCDC102BQ68D86 513 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 PDCL2Q8N4E4 241 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 NFATC2IPQ8NCF5 419 aa13.29□□□□□ -0.28
NOD1-201ENST00000222823 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
NOD1-201ENST00000222823 HOXC9P31274 260 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 CCDC191Q8NCU4 936 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 CPLX3Q8WVH0 158 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 TSG101Q99816 390 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 HCLS1P14317 486 aaPredicted RBP13.28□□□□□ -0.28
NOD1-201ENST00000222823 IDEP14735 1019 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 STX1AQ16623 288 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 MCMDC2Q4G0Z9 681 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 SPTY2D1Q68D10 685 aaPredicted RBP13.28□□□□□ -0.28
NOD1-201ENST00000222823 CCDC12Q8WUD4 166 aaPredicted RBP13.28□□□□□ -0.28
NOD1-201ENST00000222823 UBA5Q9GZZ9 404 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 KIF5CO60282 957 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
NOD1-201ENST00000222823 GCP02774 474 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 VAT1LQ9HCJ6 419 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
NOD1-201ENST00000222823 NEMFO60524 1076 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 ADCY5O95622 1261 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 NBPF6Q5VWK0 638 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.28
NOD1-201ENST00000222823 NBPF4Q96M43 638 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 KAT14Q9H8E8 782 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 IQSEC2Q5JU85 1478 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 KIF20AO95235 890 aa13.27□□□□□ -0.28
NOD1-201ENST00000222823 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.28
NOD1-201ENST00000222823 TRMT1Q9NXH9 659 aaKnown RBP13.27□□□□□ -0.28
NOD1-201ENST00000222823 ZNF219Q9P2Y4 722 aaPredicted RBP13.27□□□□□ -0.28
NOD1-201ENST00000222823 PTCH1Q13635 1447 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 ZBTB43O43298 467 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 RFC4P35249 363 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 CABLES1Q8TDN4 633 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 CCDC102AQ96A19 550 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 CLCN1P35523 988 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 WTAPQ15007 396 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 GIMAP6Q6P9H5 292 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 TMCO3Q6UWJ1 677 aa13.27□□□□□ -0.29
NOD1-201ENST00000222823 IQSEC3Q9UPP2 1182 aaPredicted RBP13.27□□□□□ -0.29
NOD1-201ENST00000222823 ALKQ9UM73 1620 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 TNNT1P13805 278 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 GSPT1P15170 499 aaKnown RBP13.26□□□□□ -0.29
NOD1-201ENST00000222823 GSDMDP57764 484 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 FAM193AP78312 1265 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 CWF19L2Q2TBE0 894 aaKnown RBP13.26□□□□□ -0.29
NOD1-201ENST00000222823 CUL5Q93034 780 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 RTL1A6NKG5 1358 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 NBPF7P0C2Y1 421 aaPredicted RBP13.26□□□□□ -0.29
NOD1-201ENST00000222823 SLC9C2Q5TAH2 1124 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 ANKRD18AQ8IVF6 992 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 CRNKL1Q9BZJ0 848 aaKnown RBP13.26□□□□□ -0.29
NOD1-201ENST00000222823 ADGRB1O14514 1584 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 CHMLP26374 656 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 VPS36Q86VN1 386 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 TMTC2Q8N394 836 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 GBP3Q9H0R5 595 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 C19orf44Q9H6X5 657 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
NOD1-201ENST00000222823 CYP7A1P22680 504 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 SEPT7Q16181 437 aaKnown RBP13.25□□□□□ -0.29
NOD1-201ENST00000222823 ISM2Q6H9L7 571 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
NOD1-201ENST00000222823 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
NOD1-201ENST00000222823 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 TAX1BP1Q86VP1 789 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 ESR2Q92731 530 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 INTS4Q96HW7 963 aaKnown RBP13.25□□□□□ -0.29
NOD1-201ENST00000222823 NLRP3Q96P20 1036 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 TTC41PQ6P2S7 1318 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 KCNA6P17658 529 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 AMPD3Q01432 767 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 ENOX2Q16206 610 aaKnown RBP13.25□□□□□ -0.29
NOD1-201ENST00000222823 CRACR2AQ9BSW2 395 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 KRT23Q9C075 422 aa13.25□□□□□ -0.29
NOD1-201ENST00000222823 SSR1P43307 286 aaKnown RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 MTIF2P46199 727 aaKnown RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 A2ML1A8K2U0 1454 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 YEATS4O95619 227 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 SYKP43405 635 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 TDRD12Q587J7 1177 aaKnown RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 JAKMIP3Q5VZ66 844 aa13.24□□□□□ -0.29
NOD1-201ENST00000222823 ZGPATQ8N5A5 531 aaKnown RBP13.24□□□□□ -0.29
NOD1-201ENST00000222823 ALG1Q9BT22 464 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 431.7 ms