RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 CCDC69A6NI79 296 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 BRD1O95696 1058 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 MYD88Q99836 296 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 CASQ1P31415 396 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 GNG11P61952 73 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 DNAJC10Q8IXB1 793 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 RHPN1Q8TCX5 695 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 TRMT112Q9UI30 125 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 NEXMIFQ5QGS0 1516 aa13.39□□□□□ -0.27
DNMT3B-201ENST00000201963 C3P01024 1663 aa13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 SLC3A2P08195 630 aaKnown RBP13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 POLD1P28340 1107 aa13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 EN1Q05925 392 aaPredicted RBP13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 ERICH2A1L162 156 aa13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
DNMT3B-201ENST00000201963 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 KIAA0754O94854 1291 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 TRIM34Q9BYJ4 488 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 CNNM1Q9NRU3 951 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 KCNQ2O43526 872 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 CLSTN1O94985 981 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 A1BGP04217 495 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 DMTNQ08495 405 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 MCM6Q14566 821 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 SYT10Q6XYQ8 523 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 CPLX3Q8WVH0 158 aa13.37□□□□□ -0.27
DNMT3B-201ENST00000201963 ARFGAP3Q9NP61 516 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 SBNO2Q9Y2G9 1366 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 MARCH6O60337 910 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 HSP90AB3PQ58FF7 597 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 RBM8AQ9Y5S9 174 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 GABPB1Q06547 395 aaPredicted RBP13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 RRP12Q5JTH9 1297 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 CCDC47Q96A33 483 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 MPHOSPH8Q99549 860 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 ZC3H13Q5T200 1668 aaKnown RBP13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 ELF2Q15723 593 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 HSP90AA4PQ58FG1 418 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 COPS6Q7L5N1 327 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 C8orf76Q96K31 380 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 CRACR2AQ9BSW2 395 aa13.36□□□□□ -0.27
DNMT3B-201ENST00000201963 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 LRMPQ12912 555 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 TRAPPC3LQ5T215 181 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 TXLNBQ8N3L3 684 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 DACH1Q9UI36 760 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 SOS2Q07890 1332 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 ANKARQ7Z5J8 1434 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 CCDC150Q8NCX0 1101 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 BRF1Q92994 677 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 EVI5LQ96CN4 794 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 CHPF2Q9P2E5 772 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 NIP7Q9Y221 180 aaKnown RBP eCLIP13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 KIF5CO60282 957 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 IBSPP21815 317 aaPredicted RBP13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 GBP3Q9H0R5 595 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
DNMT3B-201ENST00000201963 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 DNAAF4Q8WXU2 420 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 ZNF496Q96IT1 587 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 ATP8B2P98198 1209 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 CCDC12Q8WUD4 166 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 CENPHQ9H3R5 247 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 KCNQ3O43525 872 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 PHKG2P15735 406 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 ERO1AQ96HE7 468 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 NSFL1CQ9UNZ2 370 aaKnown RBP13.34□□□□□ -0.27
DNMT3B-201ENST00000201963 USP8P40818 1118 aa13.33□□□□□ -0.27
DNMT3B-201ENST00000201963 CBX8Q9HC52 389 aa13.33□□□□□ -0.27
DNMT3B-201ENST00000201963 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNF790Q6PG37 636 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC191Q8NCU4 936 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 IPO4Q8TEX9 1081 aaKnown RBP13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 MAP3K5Q99683 1374 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 MROH1Q8NDA8 1641 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 RPGRQ92834 1020 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms