RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Adora1Q60612 326 aa19.28■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Glrx3Q9CQM9 337 aa19.28■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Kifc2O08672 792 aa19.27■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Scaf8Q6DID3 1268 aa19.27■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Znf18Q810A1 556 aa19.27■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Tmem67Q8BR76 992 aa19.27■□□□□ 0.68
Hmgb1-208ENSMUST00000139443 Thsd7bQ6P4U0 1607 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Supt5hO55201 1082 aaKnown RBP19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Magea8O89012 320 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 AppP12023 770 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Casp1P29452 402 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 AaasP58742 546 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Llgl2Q3TJ91 1027 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Jarid2Q62315 1234 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ddx31Q6NZQ2 687 aaKnown RBP19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Sh3bp5Q9Z131 463 aa19.26■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Psme4Q5SSW2 1843 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Tpx2A2APB8 745 aaKnown RBP19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Brpf1B2RRD7 1212 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Cnot7Q60809 285 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Nlgn2Q69ZK9 836 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Q8C5K5 320 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Kcnq5Q9JK45 933 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Cfap44E9Q5M6 1843 aa19.25■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Rbbp6P97868 1790 aaKnown RBP19.24■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Znfx1Q8R151 1909 aaKnown RBP19.24■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ftl2P49945 183 aa19.24■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Tlr7P58681 1050 aa19.24■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Osbpl5Q9ER64 874 aa19.24■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Usp17lbE9Q9U0 468 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 GabrdP22933 449 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Plbd2Q3TCN2 594 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ppp1r1bQ60829 194 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Znf219Q6IQX8 726 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Bms1Q6PGF5 1284 aaKnown RBP19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ncoa5Q91W39 579 aaKnown RBP19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ascc2Q91WR3 749 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 ParvgQ9ERD8 331 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Apbb1Q9QXJ1 710 aa19.23■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Prl3d3A0A0M6L0J6 224 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 VegfbP49766 207 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 VgfQ0VGU4 617 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Ccdc51Q3URS9 406 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Fchsd1Q6PFY1 688 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Micall1Q8BGT6 870 aa19.22■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 LeprP48356 1162 aa19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Rbm27Q5SFM8 1060 aaKnown RBP19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Large2Q5XPT3 690 aa19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Rab3gap1Q80UJ7 981 aa19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Tmem87bQ8BKU8 555 aa19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 Fzd9Q9R216 592 aa19.21■□□□□ 0.67
Hmgb1-208ENSMUST00000139443 D1Pas1P16381 660 aa19.2■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Tgfb1i1Q62219 461 aa19.2■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Agtpbp1Q641K1 1218 aa19.2■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Socs7Q8VHQ2 579 aa19.2■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Polr3dQ91WD1 398 aa19.2■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Nup98Q6PFD9 1816 aaKnown RBP19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Speer4dL7N216 212 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Hoxd11P23813 323 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Zkscan8Q8BSL0 588 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Hdac9Q99N13 588 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Igf2bp3Q9CPN8 579 aaKnown RBP19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Gtf2iQ9ESZ8 998 aaKnown RBP19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Stk36Q69ZM6 1316 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Scn11aQ9R053 1765 aa19.19■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Mageb2A2AHM0 380 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Eya2O08575 532 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Gnai2P08752 355 aaKnown RBP19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Sult6b1P0CC03 303 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Mmp14P53690 582 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Atp8a2P98200 1148 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Fbxo33Q8VE08 562 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Ppil2Q9D787 521 aa19.18■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Pde8bE9Q4S1 865 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Cap1P40124 474 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Slc4a10Q5DTL9 1118 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Nell2Q61220 819 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Maco1Q7TQE6 664 aaKnown RBP19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Sh3bp5lQ99LH9 392 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Fbxo3Q9DC63 480 aa19.17■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Ifi207E9Q3L4 978 aa19.16■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Nkx1-1G3UXB3 402 aa19.16■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Pde4aO89084 844 aa19.16■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Rrs1Q9CYH6 365 aaKnown RBP19.16■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 LratQ9JI60 231 aa19.16■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Plekhf1Q3TB82 279 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 EspnlQ3UYR4 1005 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Phf23Q8BSN5 401 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Ciao1Q99KN2 339 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Telo2Q9DC40 840 aaKnown RBP19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 MvpQ9EQK5 861 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Ripk4Q9ERK0 786 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Kdm3aQ6PCM1 1323 aa19.15■□□□□ 0.66
Hmgb1-208ENSMUST00000139443 Prkar2bP31324 416 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 Spg7Q3ULF4 781 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 LdhdQ7TNG8 484 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 Dhx38Q80X98 1228 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 Trappc12Q8K2L8 797 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 Trmt44Q9D2Q2 713 aa19.14■□□□□ 0.65
Hmgb1-208ENSMUST00000139443 Irs4Q9Z0Y7 1216 aa19.14■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms