RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Rrp1P56183 494 aaKnown RBP20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Dclk3Q8BWQ5 790 aa20.34■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Igf2bp2Q5SF07 592 aaKnown RBP20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Rps6kb1Q8BSK8 525 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Tmx4Q8C0L0 335 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Arfgap2Q99K28 520 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 SsbP32067 415 aaKnown RBP20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ttc12Q8BW49 704 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Fmn2Q9JL04 1578 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Ppp1r21Q3TDD9 780 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Tceanc2Q8R2M0 207 aa20.33■□□□□ 0.85
Col4a3bp-202ENSMUST00000109444 Tax1bp1Q3UKC1 814 aaKnown RBP20.33■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Zbtb3Q91X45 518 aa20.33■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Oas2E9Q9A9 742 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Atp2b3Q0VF55 1220 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ccdc148Q6P5U8 527 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Triml1Q8BVP1 470 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Gramd4Q8CB44 633 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Haus2Q9CQS9 234 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Tnnc1P19123 161 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ift122Q6NWV3 1182 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Atg3Q9CPX6 314 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Mkrn1Q9QXP6 481 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Fam186bD3Z420 943 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ncaph2Q8BSP2 607 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 RalylQ8BTF8 293 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 ParvgQ9ERD8 331 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Arhgef40Q3UPH7 1517 aa20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Sdad1Q80UZ2 687 aaKnown RBP20.32■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 DymQ8CHY3 669 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Sh3d21Q7TSG5 549 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Six6os1Q9CTN5 574 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Myom2Q14BI5 1463 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ankrd40Q5SUE8 363 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Maip1Q8BHE8 291 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Exoc1Q8R3S6 894 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Zkscan5Q9Z1D8 819 aa20.31■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Rasal2E9PW37 1286 aa20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 DlatQ8BMF4 642 aa20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Trak2Q6P9N8 913 aa20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ccdc82Q6PG04 518 aa20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Acot9Q9R0X4 439 aaKnown RBP20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Fam213aQ9CYH2 218 aa20.3■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Dennd3A2RT67 1274 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Zbtb21E9Q444 1094 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Gm28047Q3US59 414 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Cyp7a1Q64505 503 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Plxnc1Q9QZC2 1574 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Mdm2P23804 489 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Cdr2P97817 455 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Rapgef3Q8VCC8 918 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Farp2Q91VS8 1065 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Bicc1Q99MQ1 977 aaKnown RBP20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Slc1a4O35874 532 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Wdhd1P59328 1117 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Calcoco1Q8CGU1 691 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Terf2ipQ91VL8 393 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Osbpl5Q9ER64 874 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Slf2Q6P9P0 1278 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 GptQ8QZR5 496 aa20.29■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Gas2l2Q5SSG4 860 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Gm44503E9PYU5 387 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Tcp11l1Q8BTG3 509 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Atp1a4Q9WV27 1032 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ces1aE9PYP1 563 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Ercc3P49135 783 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Sun3Q5SS91 320 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Tacc2Q9JJG0 1149 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Krt15Q61414 452 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Map3k11Q80XI6 850 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Gle1Q8R322 699 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Efhd1Q9D4J1 240 aa20.28■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Kiaa1524Q8BWY9 907 aa20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Rtn1Q8K0T0 780 aa20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Nop2Q922K7 793 aaKnown RBP20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Arhgef18Q6P9R4 1021 aa20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Rassf2Q8BMS9 326 aa20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 Klc3Q91W40 508 aa20.27■□□□□ 0.84
Col4a3bp-202ENSMUST00000109444 MarcksP26645 309 aaKnown RBP20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Hsf2bpQ9D4G2 338 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Ppfibp2O35711 882 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Nf2P46662 596 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Fmnl3Q6ZPF4 1028 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Slc4a4O88343 1079 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Zfp42P22227 288 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Frat1P70339 274 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Morc2aQ69ZX6 1030 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Stx8O88983 236 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Vps37cQ8R105 352 aa20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Prpf40aQ9R1C7 953 aaKnown RBP20.26■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Serpinc1P32261 465 aa20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Lmo7E9PYF4 1699 aaKnown RBP20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Pa2g4P50580 394 aaKnown RBP20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Efcab2Q9CQ46 164 aa20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 AdnpQ9Z103 1108 aaKnown RBP20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Ifit1bl2Q3U687 466 aa20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Ranbp6Q8BIV3 1105 aa20.25■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Senp1P59110 640 aa20.24■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 VeztQ3ZK22 780 aa20.24■□□□□ 0.83
Col4a3bp-202ENSMUST00000109444 Pnpla2Q8BJ56 486 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms