RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 Cnga2Q62398 664 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc12Q8R344 166 aaKnown RBP18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Kmt5bQ3U8K7 883 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Triml1Q8BVP1 470 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Tshz3Q8CGV9 1081 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 InhbeO08717 350 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Pdia3P27773 505 aaKnown RBP18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Gng11P61953 73 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Arhgef6Q8K4I3 771 aa18.01■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Txnrd1Q9JMH6 613 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Plekhg2Q6KAU7 1340 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Kiaa1524Q8BWY9 907 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Cnot6lQ8VEG6 555 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Bicc1Q99MQ1 977 aaKnown RBP18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc112A0AUP1 442 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Bin1O08539 588 aaKnown RBP18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Kifc2O08672 792 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 SympkQ80X82 1284 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 SltmQ8CH25 1031 aaKnown RBP18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Vps18Q8R307 973 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ankrd50F7BE84 1390 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Plagl1Q9JLQ4 704 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Catsper2A2ARP9 588 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Usp37Q8C0R0 979 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Uchl5Q9WUP7 329 aa18■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Pde1cQ64338 706 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Sh3d21Q7TSG5 549 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Tbc1d5Q80XQ2 815 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ddx10Q80Y44 875 aaKnown RBP17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Krt79Q8VED5 531 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Atp8b3Q6UQ17 1335 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc94Q9D6J3 314 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Zscan29E9Q5B4 869 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Cep170Q6A065 1588 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Prl3d2F6R3P9 224 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Cops6O88545 324 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Serpina10Q8R121 448 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Syt10Q9R0N4 523 aa17.99■□□□□ 0.47
Clcn3-203ENSMUST00000093490 CebpzP53569 1052 aaKnown RBP17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Olfm5Q8BU90 496 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Als2cr12Q8BVM7 383 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ttc12Q8BW49 704 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ufl1Q8CCJ3 793 aaKnown RBP17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Fam76aQ922G2 307 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Naa16Q9DBB4 864 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Kdm4aQ8BW72 1064 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Taok3Q8BYC6 898 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Nek11Q8C0Q4 628 aa17.98■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Tbc1d8Q9Z1A9 1134 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Stk36Q69ZM6 1316 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Nfxl1E9Q8I7 918 aaKnown RBP17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc42Q5SV66 316 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 P4ha1Q60715 534 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ano2Q8CFW1 1002 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Atg3Q9CPX6 314 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Hand2Q61039 217 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Cfap65Q3V0B4 1847 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Kif1bQ60575 1816 aaKnown RBP17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ier5O89113 308 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Pdcd6ipQ9WU78 869 aaKnown RBP17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Sik1Q60670 779 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 HellsQ60848 821 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 FanclQ9CR14 375 aa17.97■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Serpinb6bO08804 377 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 IntuQ059U7 942 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc162pQ0VG85 912 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ncoa4Q5U4H9 625 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Irs4Q9Z0Y7 1216 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Vps36Q91XD6 386 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Pkd2l2Q9JLG4 621 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ccdc121E9Q6D3 323 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Nop53Q8BK35 484 aaKnown RBP17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ppp1r10Q80W00 888 aaKnown RBP17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 ParnQ8VDG3 624 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Pcdhb5Q91XZ5 792 aa17.96■□□□□ 0.47
Clcn3-203ENSMUST00000093490 Ift88Q61371 824 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Snx13Q6PHS6 957 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Rbm8a2A0A0N4SUH6 174 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Tex2Q6ZPJ0 1128 aaKnown RBP17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Nap1l4Q78ZA7 375 aaKnown RBP17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Rbm8aQ9CWZ3 174 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Chd1lQ9CXF7 900 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Tax1bp1Q3UKC1 814 aaKnown RBP17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 TrhQ62361 256 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Skor1Q8BX46 964 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Noc2lQ9WV70 747 aaKnown RBP17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Nsd3Q6P2L6 1439 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Kif24Q6NWW5 1356 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Idi1P58044 227 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 StambpQ9CQ26 424 aa17.95■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Stac3Q8BZ71 360 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Sycp2lA0A0M3U1B0 842 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Prl3d3A0A0M6L0J6 224 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Klhl10Q9D5V2 608 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Abca16E9PWJ7 1678 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Itga6Q61739 1091 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Acbd3Q8BMP6 525 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Nucb1Q02819 459 aaKnown RBP17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Arhgef18Q6P9R4 1021 aa17.94■□□□□ 0.46
Clcn3-203ENSMUST00000093490 Tyro3P55144 880 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms