RNA–Protein interactions for RNA: ENSMUST00000070478.3

Sdc3-201, Transcript of Syndecan-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc3, Length 4,973 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3-201ENSMUST00000070478 Ccdc191J3QQ27 883 aa20.35■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Syt1P46096 421 aa20.35■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Ssrp1Q08943 708 aaKnown RBP20.35■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Pdzrn3Q69ZS0 1063 aa20.35■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Atp8b3Q6UQ17 1335 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Cfap53Q9D439 514 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Nckap5lQ6GQX2 1323 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Pdzd9Q9D9M4 266 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Adgrl3Q80TS3 1537 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Plekhg2Q6KAU7 1340 aa20.34■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Cetn1P41209 172 aa20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Rtn1Q8K0T0 780 aa20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Rufy3Q9D394 469 aa20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Rrbp1Q99PL5 1605 aaKnown RBP20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Sult6b1P0CC03 303 aa20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Calm1P0DP26 149 aaKnown RBP20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Calm2P0DP27 149 aaKnown RBP20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Calm3P0DP28 149 aaKnown RBP20.33■□□□□ 0.85
Sdc3-201ENSMUST00000070478 Arhgef11Q68FM7 1552 aa20.33■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Lmbrd2Q8C561 694 aa20.33■□□□□ 0.84
Sdc3-201ENSMUST00000070478 BrapQ99MP8 591 aa20.33■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Kcnj4P52189 445 aa20.33■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Rbm17Q8JZX4 405 aaKnown RBP20.33■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Rnf216P58283 853 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 CpvlQ9D3S9 478 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 ParnQ8VDG3 624 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Prl3d2F6R3P9 224 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Pdia4P08003 638 aaKnown RBP20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Sptlc2P97363 560 aaKnown RBP20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Uri1Q3TLD5 531 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 RragbQ6NTA4 374 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Snx13Q6PHS6 957 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Uchl5Q9WUP7 329 aa20.32■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Gm16486A0A1D5RMD1 1434 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Cfap73J3QPZ5 306 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Gtf2a1Q99PM3 378 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Clip2Q9Z0H8 1047 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 A0A1W2P7S8 802 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Ddx17Q501J6 650 aaKnown RBP20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Cdc5lQ6A068 802 aaKnown RBP20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Znf428Q8C1M2 176 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Lman1Q9D0F3 517 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Dydc1Q9D9T0 175 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Znf335A2A5K6 1337 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Sun3Q5SS91 320 aa20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Scaf1Q5U4C3 1256 aaKnown RBP20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 AdnpQ9Z103 1108 aaKnown RBP20.31■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Rnf187Q8BFX1 236 aa20.3■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Mast3Q3U214 1321 aa20.3■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Znf692Q3U381 531 aa20.3■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Def6Q8C2K1 630 aa20.3■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Atg3Q9CPX6 314 aa20.3■□□□□ 0.84
Sdc3-201ENSMUST00000070478 MarcksP26645 309 aaKnown RBP20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Esyt1Q3U7R1 1092 aaKnown RBP20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Maats1Q8BRC6 783 aa20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Pcdhb5Q91XZ5 792 aa20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Ano8Q6PB70 1060 aa20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Calml4Q91WQ9 153 aa20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 SltmQ8CH25 1031 aaKnown RBP20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 2310002L09RikQ9D7L5 217 aa20.29■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Zkscan16A2ALW2 728 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 TsksO54887 585 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Asic4Q7TNS7 539 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Cnksr1A2A9K7 700 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Eif4g3Q80XI3 1579 aaKnown RBP20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 AU022751B1B0V2 589 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Mlh1Q9JK91 760 aa20.28■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Ccdc82Q6PG04 518 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Eif4a1P60843 406 aaKnown RBP20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 MycbpapQ5SUV2 932 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Msl1Q6PDM1 616 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Ano10Q8BH79 659 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Haus2Q9CQS9 234 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 SphkapQ6NSW3 1687 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Fchsd1Q6PFY1 688 aa20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Pdcd6ipQ9WU78 869 aaKnown RBP20.27■□□□□ 0.84
Sdc3-201ENSMUST00000070478 Smarcc2Q6PDG5 1213 aa20.27■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Gdpd2Q9ESM6 539 aa20.27■□□□□ 0.83
Sdc3-201ENSMUST00000070478 9230110C19RikQ8CC70 267 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Dbndd1Q9CZ00 160 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Lmo7E9PYF4 1699 aaKnown RBP20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Jakmip3Q5DTN8 844 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Bloc1s4Q8VED2 215 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Rlbp1Q9Z275 317 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Scaf11E9PZM7 1456 aaKnown RBP20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Palm3A2TJV2 734 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Gjc1P28229 396 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Trim28Q62318 834 aa20.26■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Asic1Q6NXK8 526 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Nop53Q8BK35 484 aaKnown RBP20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Snw1Q9CSN1 536 aaKnown RBP20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Ccdc93Q7TQK5 629 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Adamts12Q811B3 1600 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 NppbP40753 121 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Hspa4Q61316 841 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Sycp2lA0A0M3U1B0 842 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Tpx2A2APB8 745 aaKnown RBP20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Ift88Q61371 824 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 Morc2aQ69ZX6 1030 aa20.25■□□□□ 0.83
Sdc3-201ENSMUST00000070478 CltaO08585 235 aa20.24■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms