RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Agtpbp1Q641K1 1218 aa21.42■■□□□ 1.02
Trim54-201ENSMUST00000013771 NexnQ7TPW1 607 aa21.42■■□□□ 1.02
Trim54-201ENSMUST00000013771 Ccdc142Q8CAI1 738 aa21.42■■□□□ 1.02
Trim54-201ENSMUST00000013771 Smc4Q8CG47 1286 aa21.42■■□□□ 1.02
Trim54-201ENSMUST00000013771 Shtn1Q8K2Q9 631 aa21.42■■□□□ 1.02
Trim54-201ENSMUST00000013771 Phrf1A6H619 1682 aa21.41■■□□□ 1.02
Trim54-201ENSMUST00000013771 Cfdp1O88271 295 aaKnown RBP21.41■■□□□ 1.02
Trim54-201ENSMUST00000013771 Q3UJP5 209 aa21.41■■□□□ 1.02
Trim54-201ENSMUST00000013771 Slc4a2P13808 1237 aaKnown RBP21.4■■□□□ 1.02
Trim54-201ENSMUST00000013771 Abhd15Q5F2F2 459 aa21.4■■□□□ 1.02
Trim54-201ENSMUST00000013771 Bend3Q6PAL0 825 aa21.4■■□□□ 1.02
Trim54-201ENSMUST00000013771 Polr2aP08775 1970 aaKnown RBP21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 Kifc2O08672 792 aa21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 Cap1P40124 474 aa21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 Csrnp1P59054 583 aa21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 Aifm3Q3TY86 605 aa21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 Foxd1Q61345 456 aa21.39■■□□□ 1.02
Trim54-201ENSMUST00000013771 HunkO88866 714 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Hspa8P63017 646 aaKnown RBP21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Znf496Q5SXI5 585 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Ddx31Q6NZQ2 687 aaKnown RBP21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 WdpcpQ8C456 722 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Ccdc60Q8C4J0 545 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Glrx3Q9CQM9 337 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 NrapQ80XB4 1728 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Rbbp6P97868 1790 aaKnown RBP21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Prpmp5E9PXN1 296 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Gnat3Q3V3I2 354 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Large2Q5XPT3 690 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Znf18Q810A1 556 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Ccdc30Q8BVF4 654 aa21.38■■□□□ 1.01
Trim54-201ENSMUST00000013771 Usp17lbE9Q9U0 468 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 LtbrP50284 415 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 OsbpQ3B7Z2 805 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Oog3Q3UWY1 500 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Slc38a10Q5I012 1090 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Trappc12Q8K2L8 797 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Polr3glQ8R0C0 218 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Tmem143Q8VD26 458 aa21.37■■□□□ 1.01
Trim54-201ENSMUST00000013771 Mageb2A2AHM0 380 aa21.36■■□□□ 1.01
Trim54-201ENSMUST00000013771 Grm8P47743 908 aa21.36■■□□□ 1.01
Trim54-201ENSMUST00000013771 Arrdc4A0A0B4J1F4 415 aa21.35■■□□□ 1.01
Trim54-201ENSMUST00000013771 Zmynd8A2A484 1235 aaKnown RBP21.35■■□□□ 1.01
Trim54-201ENSMUST00000013771 Zcchc17Q9ESX4 241 aaKnown RBP21.35■■□□□ 1.01
Trim54-201ENSMUST00000013771 SisF8VQM5 1818 aa21.34■■□□□ 1.01
Trim54-201ENSMUST00000013771 Nectin2P32507 530 aa21.34■■□□□ 1.01
Trim54-201ENSMUST00000013771 Tmco5bQ80X59 307 aa21.34■■□□□ 1.01
Trim54-201ENSMUST00000013771 Ccar1Q8CH18 1146 aaKnown RBP21.34■■□□□ 1.01
Trim54-201ENSMUST00000013771 Brpf1B2RRD7 1212 aa21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 Csrnp3P59055 597 aa21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 Cog5Q8C0L8 829 aa21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 Ndfip2Q91ZP6 311 aa21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 Mrpl12Q9DB15 201 aaKnown RBP21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 Prg3Q9JL95 222 aa21.33■■□□□ 1.01
Trim54-201ENSMUST00000013771 GabreA2AMW3 916 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Pde4aO89084 844 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Anxa1P10107 346 aaKnown RBP21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Ccdc51Q3URS9 406 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Sirt2Q8VDQ8 389 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Mkrn1Q9QXP6 481 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Scn11aQ9R053 1765 aa21.32■■□□□ 1
Trim54-201ENSMUST00000013771 Mmp14P53690 582 aa21.31■■□□□ 1
Trim54-201ENSMUST00000013771 Tll1Q62381 1013 aa21.31■■□□□ 1
Trim54-201ENSMUST00000013771 Bms1Q6PGF5 1284 aaKnown RBP21.31■■□□□ 1
Trim54-201ENSMUST00000013771 Lman1lQ8VCD3 505 aa21.31■■□□□ 1
Trim54-201ENSMUST00000013771 Bin2D3Z6Q9 489 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 GpkowQ56A08 488 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 LdhdQ7TNG8 484 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 Plekhm2Q80TQ5 1018 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 Pxylp1Q8BHA9 480 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 Plekho1Q9JIY0 408 aa21.3■■□□□ 1
Trim54-201ENSMUST00000013771 Casp1P29452 402 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Ttll12Q3UDE2 639 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Slain1Q68FF7 579 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Peak1Q69Z38 1735 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Fchsd1Q6PFY1 688 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Kbtbd13Q8C828 458 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Hdac9Q99N13 588 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Gtf2iQ9ESZ8 998 aaKnown RBP21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Col3a1P08121 1464 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Mansc4Q3UU94 337 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Akap4Q60662 849 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Nell2Q61220 819 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Sh3bp5Q9Z131 463 aa21.29■■□□□ 1
Trim54-201ENSMUST00000013771 Irf6P97431 467 aa21.28■■□□□ 1
Trim54-201ENSMUST00000013771 G3bp1P97855 465 aaKnown RBP21.28■■□□□ 1
Trim54-201ENSMUST00000013771 Phf23Q8BSN5 401 aa21.28■■□□□ 1
Trim54-201ENSMUST00000013771 Wnt10bP48614 389 aa21.27■■□□□ 1
Trim54-201ENSMUST00000013771 EspnlQ3UYR4 1005 aa21.27■■□□□ 1
Trim54-201ENSMUST00000013771 Cavin2Q63918 418 aaKnown RBP21.27■■□□□ 1
Trim54-201ENSMUST00000013771 Osbpl5Q9ER64 874 aa21.27■■□□□ 1
Trim54-201ENSMUST00000013771 Ccdc171E9Q1U1 1324 aa21.27■□□□□ 0.99
Trim54-201ENSMUST00000013771 Eif3aP23116 1344 aaKnown RBP21.27■□□□□ 0.99
Trim54-201ENSMUST00000013771 Gpr182P43142 395 aa21.26■□□□□ 0.99
Trim54-201ENSMUST00000013771 Slc10a4Q3UEZ8 437 aa21.26■□□□□ 0.99
Trim54-201ENSMUST00000013771 Col26a1Q91VF6 440 aa21.26■□□□□ 0.99
Trim54-201ENSMUST00000013771 Ddx20Q9JJY4 825 aaKnown RBP21.26■□□□□ 0.99
Trim54-201ENSMUST00000013771 Znfx1Q8R151 1909 aaKnown RBP21.26■□□□□ 0.99
Trim54-201ENSMUST00000013771 Ifi207E9Q3L4 978 aa21.25■□□□□ 0.99
Trim54-201ENSMUST00000013771 Jarid2Q62315 1234 aa21.25■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms