RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 NUBP1P53384 320 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PRSS12P56730 875 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MFGE8Q08431 387 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 ACSM1Q08AH1 577 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GGTLC2Q14390 218 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 EMC4Q5J8M3 183 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 WDR38Q5JTN6 314 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 C9orf135Q5VTT2 229 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RPL22L1Q6P5R6 122 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 Q6ZNX1 250 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TMPPEQ6ZT21 453 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ASB18Q6ZVZ8 466 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GALNTL5Q7Z4T8 443 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GLCCI1Q86VQ1 547 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 FADS6Q8N9I5 356 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PRSS33Q8NF86 280 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 OR6N1Q8NGY5 312 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 OR5AK2Q8NH90 309 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 OTOSQ8NHW6 89 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF671Q8TAW3 534 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TSEN15Q8WW01 171 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 C11orf40Q8WZ69 217 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SLC7A6Q92536 515 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GCDHQ92947 438 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 NKD1Q969G9 470 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF837Q96EG3 531 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF845Q96IR2 970 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 COX4I2Q96KJ9 171 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SFXN2Q96NB2 322 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZFP3Q96NJ6 502 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 NEDD4LQ96PU5 975 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RBP7Q96R05 134 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 DDA1Q9BW61 102 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RBM24Q9BX46 236 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 MROQ9BYG7 248 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ALKBH4Q9NXW9 302 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MOKQ9UQ07 419 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 EMC9Q9Y3B6 208 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CSAG2Q9Y5P2 127 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 FKBP7Q9Y680 259 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ACACAQ13085 2346 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 A0A075B6Q4 140 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 A0A0G2JMP0 313 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 A0A0X1KG70 313 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 A0A1W2PQ09 198 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 BOLA2-SMG1P6H3BVE0 249 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 RER1O15258 196 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 OGG1O15527 345 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 ZNF208O43345 1280 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 LMX1BO60663 402 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 CBR3O75828 277 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 HPP00738 406 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 EIF4EP06730 217 aaKnown RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 HNRNPCP07910 306 aaKnown RBP eCLIP3.06□□□□□ -1.92
LIG4-205ENST00000614526 TACSTD2P09758 323 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 PATE4P0C8F1 98 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 ATF1P18846 271 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SRMP19623 302 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 RANBP1P43487 201 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SELENOPP49908 381 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 CCL11P51671 97 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SUCLG1P53597 346 aaKnown RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 SUMO3P55854 103 aaPredicted RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 DSCR4P56555 118 aaPredicted RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 TAS2R43P59537 309 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 ZNF45Q02386 682 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 HSF2Q03933 536 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SELENBP1Q13228 472 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 ALKBH1Q13686 389 aaKnown RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 CSRP2Q16527 193 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 HSD17B12Q53GQ0 312 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 CEP78Q5JTW2 689 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 PHYHD1Q5SRE7 291 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SLC18B1Q6NT16 456 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SFXN4Q6P4A7 337 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 PXKQ7Z7A4 578 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 SYS1Q8N2H4 156 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SLC43A2Q8N370 569 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 PRSS35Q8N3Z0 413 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 MS4A15Q8N5U1 240 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 OR10H5Q8NGA6 315 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 OR4M2Q8NGB6 313 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 OR2G2Q8NGZ5 317 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 OIT3Q8WWZ8 545 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 TMEM106AQ96A25 262 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 RNF166Q96A37 237 aaPredicted RBP3.06□□□□□ -1.92
LIG4-205ENST00000614526 ZPBPQ9BS86 351 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 JAM3Q9BX67 310 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SRXN1Q9BYN0 137 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 POTEKPQ9BYX7 375 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.06□□□□□ -1.929e-8■■■■■ 29.3
LIG4-205ENST00000614526 KCNK15Q9H427 330 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 SACM1LQ9NTJ5 587 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 EXTL2Q9UBQ6 330 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 B3GALT5Q9Y2C3 310 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 ZNF281Q9Y2X9 895 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 LRP12Q9Y561 859 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 V9GYH0 126 aa3.06□□□□□ -1.92
LIG4-205ENST00000614526 PCSK5Q92824 1860 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms