RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 A0A0A6YYJ9 748 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 A0A0G2JMP0 313 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 A0A0X1KG70 313 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 PLPP2O43688 288 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 PIP5K1CO60331 668 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 SNAP29O95721 258 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ANPEPP15144 967 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF250P15622 560 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ACADSP16219 412 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF32P17041 273 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 FUT1P19526 365 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 MAKP20794 623 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF81P51508 661 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 ERVK-25P63136 954 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 VMACQ2NL98 169 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 HFEQ30201 348 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 DCAF12L2Q5VW00 463 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 HDDC2Q7Z4H3 204 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 OR4M2Q8NGB6 313 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 AKR7LQ8NHP1 331 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 MOSPD2Q8NHP6 518 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 IPCEF1Q8WWN9 437 aaPredicted RBP11.68□□□□□ -0.54
HDAC5-208ENST00000588419 RASSF5Q8WWW0 418 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 TIMD4Q96H15 378 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 PRSS27Q9BQR3 290 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 SLC19A3Q9BZV2 496 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 KAT8Q9H7Z6 458 aaKnown RBP11.68□□□□□ -0.54
HDAC5-208ENST00000588419 NANOGQ9H9S0 305 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 C20orf141Q9NUB4 165 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 INTS9Q9NV88 658 aaKnown RBP11.68□□□□□ -0.54
HDAC5-208ENST00000588419 UBAP1Q9NZ09 502 aa11.68□□□□□ -0.54
HDAC5-208ENST00000588419 A0A0G2JND7 137 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 C5orf49A4QMS7 147 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 TRIM77I1YAP6 450 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 AVPP01185 164 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 MT-ND1P03886 318 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 STOMP27105 288 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 MPV17P39210 176 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 CRYBB2P43320 205 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 HNRNPA0Q13151 305 aaKnown RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 LRRC23Q53EV4 343 aaPredicted RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 THEM4Q5T1C6 240 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 PEG10Q86TG7 708 aaKnown RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF101Q8IZC7 436 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 BPIFB2Q8N4F0 458 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 DPP10Q8N608 796 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 C3orf56Q8N813 242 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 CPEB3Q8NE35 698 aaKnown RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 ABHD4Q8TB40 342 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 SLC25A40Q8TBP6 338 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 TMEM239Q8WW34 195 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 C22orf15Q8WYQ4 148 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 CCL17Q92583 94 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 HDAC2Q92769 488 aaKnown RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 ELMOD3Q96FG2 381 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 SLC6A7Q99884 636 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF426Q9BUY5 554 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 G6PC2Q9NQR9 355 aa11.67□□□□□ -0.54
HDAC5-208ENST00000588419 EIF3KQ9UBQ5 218 aaKnown RBP11.67□□□□□ -0.54
HDAC5-208ENST00000588419 NBEAL1Q6ZS30 2694 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 IGKV1D-43A0A0B4J1Z2 117 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 A0A1W2PPL8 197 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 IGHV1-46P01743 117 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 IGHV2-5P01817 119 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 MMP7P09237 267 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 WNT5AP41221 380 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 OR1E2P47887 323 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 GDI2P50395 445 aaKnown RBP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 CRYBA2P53672 197 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 LCN2P80188 198 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 SF3A3Q12874 501 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 PIN1Q13526 163 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 MOGQ16653 247 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 HIST3H3Q16695 136 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 ZNF718Q3SXZ3 478 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 RABL3Q5HYI8 236 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 RFPL4BQ6ZWI9 263 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 IGFN1Q86VF2 1251 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 MICU2Q8IYU8 434 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 CLDN22Q8N7P3 220 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 GEMIN6Q8WXD5 167 aaKnown RBP11.66□□□□□ -0.54
HDAC5-208ENST00000588419 RAB1CQ92928 201 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 TMPRSS13Q9BYE2 586 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 PCDHAC1Q9H158 963 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 RIMS3Q9UJD0 308 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 MED31Q9Y3C7 131 aa11.66□□□□□ -0.54
HDAC5-208ENST00000588419 RBM34P42696 430 aaKnown RBP11.65□□□□□ -0.54
HDAC5-208ENST00000588419 HILS1P60008 231 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 LAPTM4AQ15012 233 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 TAF11Q15544 211 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 MMEL1Q495T6 779 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 NRN1LQ496H8 165 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 ALG10Q5BKT4 473 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 C10orf128Q5T292 105 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 C1QL2Q7Z5L3 287 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 TEX29Q8N6K0 151 aa11.65□□□□□ -0.54
HDAC5-208ENST00000588419 ZFAND2BQ8WV99 257 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms