RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CD47Q08722 323 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 SGCAQ16586 387 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 UGT2A3Q6UWM9 527 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 VTCN1Q7Z7D3 282 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF519Q8TB69 540 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 SYNPRQ8TBG9 265 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 C11orf40Q8WZ69 217 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 NMD3Q96D46 503 aaKnown RBP13.61□□□□□ -0.23
CRLF3-203ENST00000578692 RBP7Q96R05 134 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 HOPXQ9BPY8 73 aaPredicted RBP13.61□□□□□ -0.23
CRLF3-203ENST00000578692 BCL2L14Q9BZR8 327 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 TAAR3PQ9P1P4 343 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 RHCGQ9UBD6 479 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 GPR160Q9UJ42 338 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 SNX13Q9Y5W8 968 aa13.61□□□□□ -0.23
CRLF3-203ENST00000578692 J3KTA2 159 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CXCR6O00574 342 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 GSTA4O15217 222 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CCDC22O60826 627 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 IFNW1P05000 195 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 SAGP10523 405 aaPredicted RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 NR2C1P13056 603 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 MAKP20794 623 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 ACHEP22303 614 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 APLNRP35414 380 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 MDH1P40925 334 aaKnown RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 KLF3P57682 345 aaPredicted RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CTXN1P60606 82 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 RPL27P61353 136 aaKnown RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 PRKCDQ05655 676 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 FMODQ06828 376 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 TOP3AQ13472 1001 aaPredicted RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 TRAM2Q15035 370 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 NKPD1Q17RQ9 610 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CR1LQ2VPA4 569 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 ALKBH6Q3KRA9 238 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 PABPC1L2AQ5JQF8 200 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 THEM4Q5T1C6 240 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 SLC25A47Q6Q0C1 308 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 NRMQ8IXM6 262 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 LINC01356Q8N9X3 169 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CPEB3Q8NE35 698 aaKnown RBP13.6□□□□□ -0.23
CRLF3-203ENST00000578692 NSMAFQ92636 917 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 EFCAB1Q9HAE3 211 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 CCNB1IP1Q9NPC3 277 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 UGT2A1Q9Y4X1 527 aa13.6□□□□□ -0.23
CRLF3-203ENST00000578692 IGLV3-9A0A075B6K5 115 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 GMNCA6NCL1 334 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 FFAR1O14842 300 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF682O95780 498 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF32P17041 273 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 CCNOP22674 350 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 GPR6P46095 362 aaPredicted RBP13.59□□□□□ -0.23
CRLF3-203ENST00000578692 TMEM33P57088 247 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ERVS71-1P61550 626 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ANKDD1AQ495B1 522 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 FKBP9P1Q75LS8 142 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 CBLL1Q75N03 491 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 OAFQ86UD1 273 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 IGFN1Q86VF2 1251 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 RNF113BQ8IZP6 322 aaKnown RBP13.59□□□□□ -0.23
CRLF3-203ENST00000578692 OFCC1Q8IZS5 231 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ICA1LQ8NDH6 482 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 OR51A7Q8NH64 312 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 FNDC8Q8TC99 324 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 GEMIN6Q8WXD5 167 aaKnown RBP13.59□□□□□ -0.23
CRLF3-203ENST00000578692 YIPF5Q969M3 257 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 NABP1Q96AH0 204 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 C1orf159Q96HA4 380 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 TSPAN32Q96QS1 320 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 ALG12Q9BV10 488 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 MAN2C1Q9NTJ4 1040 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 SLCO1C1Q9NYB5 712 aa13.59□□□□□ -0.23
CRLF3-203ENST00000578692 TMEFF2Q9UIK5 374 aaPredicted RBP13.59□□□□□ -0.23
CRLF3-203ENST00000578692 C17orf100A8MU93 164 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 NME4O00746 187 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 IGHMP01871 453 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 STOMP27105 288 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 GUCA1AP43080 201 aaPredicted RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 MAGEB1P43366 347 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 SLC7A2P52569 658 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 CDH15P55291 814 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 MRPS11P82912 194 aaKnown RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 CCNIQ14094 377 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 MOGQ16653 247 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 IFI44LQ53G44 452 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 TMEM154Q6P9G4 183 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 MEX3DQ86XN8 651 aaKnown RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 LRRC75AQ8NAA5 344 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 OR1J1Q8NGS3 322 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 SNX33Q8WV41 574 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 ACOT11Q8WXI4 607 aaPredicted RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 MED4Q9NPJ6 270 aa13.58□□□□□ -0.23
CRLF3-203ENST00000578692 HINT3Q9NQE9 182 aaKnown RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 ZNF275Q9NSD4 429 aaPredicted RBP13.58□□□□□ -0.23
CRLF3-203ENST00000578692 TRAV27A0A087WT01 109 aa13.58□□□□□ -0.24
CRLF3-203ENST00000578692 A0A087WUU8 490 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms