RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 DEPDC4Q8N2C3 294 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 OR8D4Q8NGM9 314 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 DUS3LQ96G46 650 aaKnown RBP19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 FEVQ99581 238 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 IFT27Q9BW83 186 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 PLA2G12AQ9BZM1 189 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 DENND2DQ9H6A0 471 aaPredicted RBP19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 NTN4Q9HB63 628 aa19.74■□□□□ 0.75
SFSWAP-204ENST00000535399 PLCE1Q9P212 2302 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 MGRN1O60291 552 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 TIPRLO75663 272 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 DANCRP0C864 163 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 ZNF14P17017 642 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 PTDSS1P48651 473 aaKnown RBP19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 PGGHGQ32M88 737 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 RPL13AP3Q6NVV1 102 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 CD300LDQ6UXZ3 194 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 SLC16A14Q7RTX9 510 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 DPPA2Q7Z7J5 298 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 HS3ST5Q8IZT8 346 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 SMAP2Q8WU79 429 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 PIGTQ969N2 578 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 MS4A3Q96HJ5 214 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 FOXC2Q99958 501 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 NIPSNAP1Q9BPW8 284 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 SYT4Q9H2B2 425 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 BEX4Q9NWD9 120 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 PDP1Q9P0J1 537 aaPredicted RBP19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 POU2F3Q9UKI9 436 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 ATP23Q9Y6H3 246 aa19.73■□□□□ 0.75
SFSWAP-204ENST00000535399 IDH3BO43837 385 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 E2F6O75461 281 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 CRYAAP02489 173 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 TP53P04637 393 aaPredicted RBP19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 SOD3P08294 240 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 IGFBP1P08833 259 aaPredicted RBP19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 HIST1H1CP16403 213 aaKnown RBP19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 CTLA4P16410 223 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 GSTM3P21266 225 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 ART1P52961 327 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 SGCAQ16586 387 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 CLEC12AQ5QGZ9 265 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 LRRC18Q8N456 261 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 KCNS3Q9BQ31 491 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 CXXC4Q9H2H0 198 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 ARMC1Q9NVT9 282 aa19.72■□□□□ 0.75
SFSWAP-204ENST00000535399 IGHV2OR16-5A0A0B4J2B6 119 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 BHLHE40O14503 412 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 DEAF1O75398 565 aaPredicted RBP19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 RAB36O95755 333 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 SCG5P05408 212 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 MMP7P09237 267 aaPredicted RBP19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 RAB39AQ14964 217 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 FAM27BQ5VT28 67 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 ZNF584Q8IVC4 421 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 IL17RDQ8NFM7 739 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 OR52L1Q8NGH7 329 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 OR4K13Q8NH42 304 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 DHRS9Q9BPW9 319 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 LAMP3Q9UQV4 416 aa19.71■□□□□ 0.75
SFSWAP-204ENST00000535399 SLC16A7O60669 478 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 SOX14O95416 240 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 CD8AP01732 235 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 SERPINA5P05154 406 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 HGFACQ04756 655 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 COX10Q12887 443 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 SLC36A2Q495M3 483 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 TMEM53Q6P2H8 277 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 DTX2Q86UW9 622 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 JAZF1Q86VZ6 243 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 FBXO17Q96EF6 278 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 SNX18Q96RF0 628 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 NMNAT3Q96T66 252 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 TSSK6Q9BXA6 273 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 NUAK2Q9H093 628 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 RNF121Q9H920 327 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 POLE4Q9NR33 117 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 FBXL3Q9UKT7 428 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 AP4S1Q9Y587 144 aa19.7■□□□□ 0.74
SFSWAP-204ENST00000535399 A0A1W2PPL8 197 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 TMCC2O75069 709 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 KHDRBS3O75525 346 aaKnown RBP19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 MSR1P21757 451 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 PRKACGP22612 351 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 LAP3P28838 519 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 NOS3P29474 1203 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 ATP6AP1Q15904 470 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 SLC35F1Q5T1Q4 408 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 ZNF544Q6NX49 715 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 LEG1Q6P5S2 330 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 SHQ1Q6PI26 577 aaKnown RBP19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 NPEPL1Q8NDH3 523 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 OR4F15Q8NGB8 312 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 OR4Q3Q8NH05 313 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 TMEM171Q8WVE6 324 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 TSSK2Q96PF2 358 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 TRAF4Q9BUZ4 470 aaPredicted RBP19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 TBC1D23Q9NUY8 699 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 REV1Q9UBZ9 1251 aa19.69■□□□□ 0.74
SFSWAP-204ENST00000535399 OVOL3O00110 214 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms