RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SERTAD2Q14140 314 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 FAM53BQ14153 422 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ITPRIPL2Q3MIP1 535 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 AVPI1Q5T686 147 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 OR8K3Q8NH51 312 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 OIT3Q8WWZ8 545 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 TOX2Q96NM4 488 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 G6PC3Q9BUM1 346 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 MMP26Q9NRE1 261 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 A0A1B0GTH9 108 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 SERINC4A6NH21 518 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 OR2AT4A6NND4 320 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 GNB5O14775 395 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 LDLRAD4O15165 306 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 GNRH1P01148 92 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 FOLR2P14207 255 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 AQP2P41181 271 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 BLOC1S1P78537 153 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 ELOCQ15369 112 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 GXYLT1Q4G148 440 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 ALG10Q5BKT4 473 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 WDR38Q5JTN6 314 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 EEF1A1P5Q5VTE0 462 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 RAB12Q6IQ22 244 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 H3F3CQ6NXT2 135 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 MRPL43Q8N983 215 aaKnown RBP16.05■□□□□ 0.16
NUP54-205ENST00000507257 RCBTB1Q8NDN9 531 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 CD99L2Q8TCZ2 262 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 SFT2D1Q8WV19 159 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 RNF141Q8WVD5 230 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 TSEN15Q8WW01 171 aaKnown RBP16.05■□□□□ 0.16
NUP54-205ENST00000507257 VSTM2LQ96N03 204 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 CNTNAP3BQ96NU0 1288 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 TSSK2Q96PF2 358 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 CDC6Q99741 560 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 SRMSQ9H3Y6 488 aa16.05■□□□□ 0.16
NUP54-205ENST00000507257 PDE4DIPQ5VU43 2346 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 HIDE1A8MVS5 230 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ACTL6AO96019 429 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ABOP16442 354 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CAPZA1P52907 286 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CTXN1P60606 82 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CCINQ13939 588 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 TEX30Q5JUR7 227 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 PRAMEF17Q5VTA0 474 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CBLN2Q8IUK8 224 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CA13Q8N1Q1 262 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ASB17Q8WXJ9 295 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 INTS14Q96SY0 518 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 PHB2Q99623 299 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ZNF768Q9H5H4 540 aaKnown RBP16.04■□□□□ 0.16
NUP54-205ENST00000507257 RNF122Q9H9V4 155 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 FANCFQ9NPI8 374 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CXXC1Q9P0U4 656 aaPredicted RBP16.04■□□□□ 0.16
NUP54-205ENST00000507257 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 SCN2AQ99250 2005 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ZNF860A6NHJ4 632 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 M0QYG6 137 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 AKR7A3O95154 331 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 CSTAP01040 98 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ASAH2BP0C7U1 165 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 IGFBP3P17936 291 aaPredicted RBP16.04■□□□□ 0.16
NUP54-205ENST00000507257 C5AR1P21730 350 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 HTR2CP28335 458 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 RPS21P63220 83 aaKnown RBP16.04■□□□□ 0.16
NUP54-205ENST00000507257 CST6Q15828 149 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ASPHD2Q6ICH7 369 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 FIGLAQ6QHK4 219 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
NUP54-205ENST00000507257 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 OR6N2Q8NGY6 317 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 OTOSQ8NHW6 89 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ING5Q8WYH8 240 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 OR8B4Q96RC9 309 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 ZFYVE21Q9BQ24 234 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 FBXO4Q9UKT5 387 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 TBX21Q9UL17 535 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 VSIG4Q9Y279 399 aa16.04■□□□□ 0.16
NUP54-205ENST00000507257 C9orf170A2RU37 121 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 MEGF11A6BM72 1044 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ELOA3DA6NLF2 546 aaPredicted RBP16.03■□□□□ 0.16
NUP54-205ENST00000507257 DCTN6O00399 190 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ALOX12BO75342 701 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ADH1BP00325 375 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 RENP00797 406 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 POU2F2P09086 479 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 PBX2P40425 430 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 PNLIPRP2P54317 469 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 RAB38P57729 211 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ENPP2Q13822 863 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ELOA3BQ3SY89 546 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 DPY19L4Q7Z388 723 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ADGRE4PQ86SQ3 457 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 PARGQ86W56 976 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 BAP18Q8IXM2 172 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ELOA3Q8NG57 546 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 OR2M4Q96R27 311 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 SLC6A7Q99884 636 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 ZNF304Q9HCX3 659 aa16.03■□□□□ 0.16
NUP54-205ENST00000507257 MMP25Q9NPA2 562 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms