RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 DSCR9P59020 149 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 DSTNP60981 165 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 FKBP3Q00688 224 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 DR1Q01658 176 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 STX4Q12846 297 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNHIT3Q15649 155 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 BCL2A1Q16548 175 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 KYAT1Q16773 422 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RGS21Q2M5E4 152 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 PGGHGQ32M88 737 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 NSUN5P1Q3KNT7 163 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 TMEM31Q5JXX7 168 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 LINC00242Q5T6M2 205 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 FAM173BQ6P4H8 233 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 FRRS1Q6ZNA5 592 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 GDPD3Q7L5L3 318 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 MRPL55Q7Z7F7 128 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 LRRTM1Q86UE6 522 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RALGPS2Q86X27 583 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 CATSPER3Q86XQ3 398 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ABHD12Q8N2K0 398 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF786Q8N393 782 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 SVOPLQ8N434 492 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF557Q8N988 423 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 KLHDC9Q8NEP7 349 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR51E1Q8TCB6 317 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 PGLYRP4Q96LB8 373 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 C1QTNF4Q9BXJ3 329 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 PARD6GQ9BYG4 376 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ISG20L2Q9H9L3 353 aaKnown RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ISYNA1Q9NPH2 558 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 ABCB10Q9NRK6 738 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 RMND1Q9NWS8 449 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 C1orf109Q9NX04 203 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 TREM2Q9NZC2 230 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 CD274Q9NZQ7 290 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 MLXQ9UH92 298 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 L3MBTL1Q9Y468 752 aa2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 POLR3AO14802 1390 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P22-201ENST00000505315 IGHV3-20A0A0C4DH32 117 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 A0A1B0GTI1 187 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 A0A1B0GVI7 797 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 A0A1B0GWB2 263 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 TMEM213A2RRL7 107 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ISPDA4D126 451 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 G3V2L1 256 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 SGCEO43556 437 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 TRAPPC6AO75865 159 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 UTS2O95399 124 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 BRI3O95415 125 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 RAB3DO95716 219 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 GCGP01275 180 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CD48P09326 243 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 LIPCP11150 499 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MLNP12872 115 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 TBPP20226 339 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MARK3P27448 753 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ARL2P36404 184 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ACTR1BP42025 376 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 GDF5P43026 501 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MAGEA3P43357 314 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 PRLHRP49683 370 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 RPL31P62899 125 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MRPS25P82663 173 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CYCSP99999 105 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 BCL2L1Q07817 233 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ILF3Q12906 894 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 DPYSL3Q14195 570 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CAPRIN1Q14444 709 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 POU2AF1Q16633 256 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CPTPQ5TA50 214 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 OLFML2AQ68BL7 652 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 APOBEC3HQ6NTF7 200 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 PWWP2BQ6NUJ5 590 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 RWDD4Q6NW29 188 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CD300LGQ6UXG3 332 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 TMEM179Q6ZVK1 233 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 TMEM150AQ86TG1 271 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 HORMAD1Q86X24 394 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 HSD17B11Q8NBQ5 300 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 OR5AK3PQ8NH89 298 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 SFXN5Q8TD22 340 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 RNASEH2CQ8TDP1 164 aaKnown RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 SDR42E1Q8WUS8 393 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 APH1BQ8WW43 257 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MED30Q96HR3 178 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF300Q96RE9 604 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MCHR1Q99705 422 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF426Q9BUY5 554 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ELOVL4Q9GZR5 314 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CHRNA10Q9GZZ6 450 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 CENPHQ9H3R5 247 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 WDR54Q9H977 334 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 SLC40A1Q9NP59 571 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 ZNF71Q9NQZ8 489 aaPredicted RBP2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 B3GNT2Q9NY97 397 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 V9GY05 133 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 MSH6P52701 1360 aa2.98□□□□□ -1.93
HMGB1P22-201ENST00000505315 COL11A2P13942 1736 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms