RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 NMD3Q96D46 503 aaKnown RBP16.9■□□□□ 0.3
SFXN1-203ENST00000502393 REPIN1Q9BWE0 567 aaKnown RBP16.9■□□□□ 0.3
SFXN1-203ENST00000502393 CMTM6Q9NX76 183 aa16.9■□□□□ 0.3
SFXN1-203ENST00000502393 SLCO1C1Q9NYB5 712 aa16.9■□□□□ 0.3
SFXN1-203ENST00000502393 TAAR3PQ9P1P4 343 aa16.9■□□□□ 0.3
SFXN1-203ENST00000502393 ARMCX1Q9P291 453 aa16.9■□□□□ 0.3
SFXN1-203ENST00000502393 PIP5K1CO60331 668 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 LCKP06239 509 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 IFI30P13284 250 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 APLNRP35414 380 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 GPR6P46095 362 aaPredicted RBP16.89■□□□□ 0.29
SFXN1-203ENST00000502393 HSF2Q03933 536 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 FNDC8Q8TC99 324 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 NABP1Q96AH0 204 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 CCNB1IP1Q9NPC3 277 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 UGT2A1Q9Y4X1 527 aa16.89■□□□□ 0.29
SFXN1-203ENST00000502393 C17orf100A8MU93 164 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 CLPTM1O96005 669 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 IFNW1P05000 195 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 CDAP32320 146 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 RPL27P61353 136 aaKnown RBP16.88■□□□□ 0.29
SFXN1-203ENST00000502393 CD47Q08722 323 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 MOGQ16653 247 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 ANKDD1AQ495B1 522 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 PABPC1L2AQ5JQF8 200 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 THEM4Q5T1C6 240 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 SLC15A3Q8IY34 581 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 OFCC1Q8IZS5 231 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 POU5F2Q8N7G0 328 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 CPEB3Q8NE35 698 aaKnown RBP16.88■□□□□ 0.29
SFXN1-203ENST00000502393 RBP7Q96R05 134 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 ALG12Q9BV10 488 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 FNDC11Q9BVV2 318 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 ZNF416Q9BWM5 594 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 OR51B6Q9H340 312 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 HINT3Q9NQE9 182 aaKnown RBP16.88■□□□□ 0.29
SFXN1-203ENST00000502393 ZNF446Q9NWS9 450 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 TMEFF2Q9UIK5 374 aaPredicted RBP16.88■□□□□ 0.29
SFXN1-203ENST00000502393 FBN3Q75N90 2809 aa16.88■□□□□ 0.29
SFXN1-203ENST00000502393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.87■□□□□ 0.292e-13■■■■■ 40.1
SFXN1-203ENST00000502393 IGKV1D-43A0A0B4J1Z2 117 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 B4DSR2 109 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 NCR1O76036 304 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 IGHMP01871 453 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 SAGP10523 405 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 STOMP27105 288 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 DVL1P1P54792 670 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 ERVS71-1P61550 626 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 LIPEQ05469 1076 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 FMODQ06828 376 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 TOP3AQ13472 1001 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 CCNIQ14094 377 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 TRAM2Q15035 370 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 SGCAQ16586 387 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 PCGF3Q3KNV8 242 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 ALKBH6Q3KRA9 238 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 FAM27BQ5VT28 67 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 FAM205BPQ63HN1 556 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 TMEM154Q6P9G4 183 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 SLC25A47Q6Q0C1 308 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 VTCN1Q7Z7D3 282 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 RNF113BQ8IZP6 322 aaKnown RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 SNX33Q8WV41 574 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 NSMAFQ92636 917 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 YIPF5Q969M3 257 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 HOPXQ9BPY8 73 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 RACGAP1Q9H0H5 632 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 ZNF275Q9NSD4 429 aaPredicted RBP16.87■□□□□ 0.29
SFXN1-203ENST00000502393 NKIRAS2Q9NYR9 191 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 SNX13Q9Y5W8 968 aa16.87■□□□□ 0.29
SFXN1-203ENST00000502393 CXCR6O00574 342 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 CCDC22O60826 627 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 RP2O75695 350 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 COX4I1P13073 169 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 ZNF32P17041 273 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 MAKP20794 623 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 PCMT1P22061 227 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 MAGEB1P43366 347 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 YAP1P46937 504 aaKnown RBP16.86■□□□□ 0.29
SFXN1-203ENST00000502393 CTXN1P60606 82 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 PRKCDQ05655 676 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 UNQ6126/PRO20091Q6UXV3 157 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 OAFQ86UD1 273 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 NRMQ8IXM6 262 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 LRRC75AQ8NAA5 344 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 OR1J1Q8NGS3 322 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 GEMIN6Q8WXD5 167 aaKnown RBP16.86■□□□□ 0.29
SFXN1-203ENST00000502393 TSPAN32Q96QS1 320 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 MAN2C1Q9NTJ4 1040 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 RHCGQ9UBD6 479 aa16.86■□□□□ 0.29
SFXN1-203ENST00000502393 STAB1Q9NY15 2570 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 A6NIZ1 184 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 J3KTA2 159 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 FFAR1O14842 300 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 GSTA4O15217 222 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 ZNF682O95780 498 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 IGHV3-13P01766 116 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 TFP02787 698 aa16.85■□□□□ 0.29
SFXN1-203ENST00000502393 MT-ND5P03915 603 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms