RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 ITGA3P26006 1051 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 PLA1AQ53H76 456 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 GKN2Q86XP6 184 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 BEST3Q8N1M1 668 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 NT5CQ8TCD5 201 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 SLC39A7Q92504 469 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ST6GALNAC5Q9BVH7 336 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 GTPBP2Q9BX10 602 aaKnown RBP12.18□□□□□ -0.46
GPC1-209ENST00000495100 MFFQ9GZY8 342 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 DUSP15Q9H1R2 295 aaPredicted RBP12.18□□□□□ -0.46
GPC1-209ENST00000495100 MMP25Q9NPA2 562 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 CHRNA9Q9UGM1 479 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 SERTAD3Q9UJW9 196 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 MYO7BQ6PIF6 2116 aa12.18□□□□□ -0.46
GPC1-209ENST00000495100 TMED7-TICAM2A0A0A6YYA0 188 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 CCDC163A0A0D9SF12 145 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 TNFRSF10AO00220 468 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 SCGB1D2O95969 90 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 PDGFAP04085 211 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 HEXBP07686 556 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 THBS2P35442 1172 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 S100A10P60903 97 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 EFNB1P98172 346 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 MGAT2Q10469 447 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZNF74Q16587 644 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 MESTQ5EB52 335 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 LCN10Q6JVE6 187 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 TEX261Q6UWH6 196 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 TOR1AIP2Q8NFQ8 470 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZNF304Q9HCX3 659 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ACKR4Q9NPB9 350 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZNF230Q9UIE0 474 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 POMT2Q9UKY4 750 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 TMED7Q9Y3B3 224 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 U3KQ87 197 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 APC2O95996 2303 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 OR5K4A6NMS3 321 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 CEBPGP53567 150 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 FZD5Q13467 585 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 CD200R1LQ6Q8B3 271 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 MAMDC2Q7Z304 686 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 ABHD12BQ7Z5M8 362 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 DUSP18Q8NEJ0 188 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 LCORQ96JN0 433 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 TIMP4Q99727 224 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 MRTO4Q9UKD2 239 aaKnown RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 NPFFR2Q9Y5X5 522 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 MN1Q10571 1320 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 IGHV3-9P01782 118 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 RAF1P04049 648 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ADRA2CP18825 462 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 SLC9A3R2Q15599 337 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 COL28A1Q2UY09 1125 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 FAM209AQ5JX71 171 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 SLC18B1Q6NT16 456 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ARSKQ6UWY0 536 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 KIAA1143Q96AT1 154 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZDHHC12Q96GR4 267 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 OR2M2Q96R28 347 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZNF649Q9BS31 505 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 C12orf4Q9NQ89 552 aa12.17□□□□□ -0.46
GPC1-209ENST00000495100 ZNF701Q9NV72 531 aaPredicted RBP12.17□□□□□ -0.46
GPC1-209ENST00000495100 ACOT7O00154 380 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 KLF4O43474 513 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 KCNJ13O60928 360 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 WNT11O96014 354 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 PTGS2P35354 604 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 BIDP55957 195 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 PER3P56645 1201 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 C3orf33Q6P1S2 294 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF283Q8N7M2 679 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF485Q8NCK3 441 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 S100A13Q99584 98 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 SESN1Q9Y6P5 492 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 FER1L5A0AVI2 2057 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 IGHV3-64DA0A0J9YX35 117 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 F5H0A9 414 aaPredicted RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 AIPO00170 330 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 HLA-AP01891 365 aaKnown RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 PDCD1Q15116 288 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 C14orf28Q4W4Y0 310 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF767PQ75MW2 155 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF595Q8IYB9 648 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 OR6N1Q8NGY5 312 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 SMIM4Q8WVI0 70 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 CXorf58Q96LI9 332 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 NIPAL2Q9H841 368 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 DLL4Q9NR61 685 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 PFDN2Q9UHV9 154 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 GMEB2Q9UKD1 530 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF407Q9C0G0 2248 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 A0A0G2JK05 382 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
GPC1-209ENST00000495100 PNPP00491 289 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 SFTPBP07988 381 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 ZNF20P17024 532 aa12.16□□□□□ -0.46
GPC1-209ENST00000495100 PGCP20142 388 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms