RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 RAB1BQ9H0U4 201 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 NMNAT1Q9HAN9 279 aaPredicted RBP9.12□□□□□ -0.95
NELFE-213ENST00000494956 MOV10Q9HCE1 1003 aaKnown RBP9.12□□□□□ -0.95
NELFE-213ENST00000494956 ARL8BQ9NVJ2 186 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 ADA2Q9NZK5 511 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 IL20RAQ9UHF4 553 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 DUSP13Q9UII6 198 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 AP3M1Q9Y2T2 418 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 ADAM18Q9Y3Q7 739 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 JMJD1CQ15652 2540 aa9.12□□□□□ -0.95
NELFE-213ENST00000494956 A0A1W2PPL8 197 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 GMNCA6NCL1 334 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ATP8B1O43520 1251 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 TLX2O43763 284 aaPredicted RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 NCR1O76036 304 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 FARS2O95363 451 aaKnown RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 HPXP02790 462 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 CSF3P09919 207 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 NAT2P11245 290 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ZNF32P17041 273 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 CCNOP22674 350 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 COL8A2P25067 703 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 RBMXP38159 391 aaKnown RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 SLC9A3P48764 834 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ZNF133P52736 654 aaPredicted RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 GLO1Q04760 184 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 HNRNPA0Q13151 305 aaKnown RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 SEC23BQ15437 767 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 SLC36A2Q495M3 483 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 PABPC1L2AQ5JQF8 200 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 TMEM255AQ5JRV8 349 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 TMEM53Q6P2H8 277 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 PODNL1Q6PEZ8 512 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 MBOAT2Q6ZWT7 520 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 CPLX4Q7Z7G2 160 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 OAFQ86UD1 273 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 OR52J3Q8NH60 311 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ZNF519Q8TB69 540 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 SLC7A13Q8TCU3 470 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ACOT11Q8WXI4 607 aaPredicted RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 MSI2Q96DH6 328 aaKnown RBP9.11□□□□□ -0.95
NELFE-213ENST00000494956 CMTM5Q96DZ9 223 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 Q96M85 177 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 CHODLQ9H9P2 273 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 CDH20Q9HBT6 801 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 REV1Q9UBZ9 1251 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 ENPP4Q9Y6X5 453 aa9.11□□□□□ -0.95
NELFE-213ENST00000494956 LOC100509620A0A075B734 347 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 TRBV4-1A0A0J9YWV2 114 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 LOC390937A0A1W2PQ73 354 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 VSTM5A8MXK1 200 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 M0R233 179 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 WNT9BO14905 357 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SYNGR3O43761 229 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 IGHMP01871 453 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 LCKP06239 509 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 APEHP13798 732 aaKnown RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 LAP3P28838 519 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 PRDX6P30041 224 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 IFNA8P32881 189 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 RPL4P36578 427 aaKnown RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 MAGEB1P43366 347 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 FXYD6P3P58550 94 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 MRPS34P82930 218 aaKnown RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 PSG4Q00888 419 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 HSF2Q03933 536 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 MESTQ5EB52 335 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 FGD3Q5JSP0 725 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 ELFN2Q5R3F8 820 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SPATA46Q5T0L3 261 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 CYB5R2Q6BCY4 276 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 RGS7BPQ6MZT1 257 aaPredicted RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 UGT2A3Q6UWM9 527 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 THSD4Q6ZMP0 1018 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 HIPK1Q86Z02 1210 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 ZNF101Q8IZC7 436 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 UBASH3BQ8TF42 649 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 NEU4Q8WWR8 484 aaPredicted RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 YIPF5Q969M3 257 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 RASD2Q96D21 266 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 C7orf34Q96L11 122 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 GPA33Q99795 319 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 WNT5BQ9H1J7 359 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 DENND2DQ9H6A0 471 aaPredicted RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 NARFLQ9H6Q4 476 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SIAEQ9HAT2 523 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 EMC7Q9NPA0 242 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 CCNB1IP1Q9NPC3 277 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SPAG4Q9NPE6 437 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 DCAF13Q9NV06 445 aaKnown RBP9.1□□□□□ -0.95
NELFE-213ENST00000494956 NDUFAF4Q9P032 175 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SLC7A8Q9UHI5 535 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 SPEF1Q9Y4P9 236 aa9.1□□□□□ -0.95
NELFE-213ENST00000494956 IQCMA0A1B0GVH7 501 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 A0A1W2PPW3 197 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 NPIPB13A6NJU9 1138 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 CENPBD1B2RD01 187 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 NPIPB4C9JG80 1138 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 NDUFS8O00217 210 aa9.09□□□□□ -0.95
NELFE-213ENST00000494956 LILRA1O75019 489 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms