RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 MAKP20794 623 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 GCH1P30793 250 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 GLRXP35754 106 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 GDI2P50395 445 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 ERVK-25P63136 954 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 MRPS34P82930 218 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 RUNX1T1Q06455 604 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 FMODQ06828 376 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 DGCR6Q14129 220 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 ZBED5Q49AG3 693 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 ARMC4Q5T2S8 1044 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 TMEM154Q6P9G4 183 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 LRFN4Q6PJG9 635 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 MYPOPQ86VE0 399 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 MEX3DQ86XN8 651 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 CCDC197Q8NCU1 140 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 OR52J3Q8NH60 311 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 C10orf105Q8TEF2 133 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 C11orf40Q8WZ69 217 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 PYURFQ96I23 114 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 SORCS2Q96PQ0 1159 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 TNFRSF13CQ96RJ3 184 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 BCL2L14Q9BZR8 327 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 DCAF13Q9NV06 445 aaKnown RBP7.89□□□□□ -1.15
HDAC6-232ENST00000489053 REV1Q9UBZ9 1251 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 FZR1Q9UM11 496 aa7.89□□□□□ -1.15
HDAC6-232ENST00000489053 RAI1Q7Z5J4 1906 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 A0A087WUU8 490 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 PLSCR5A0PG75 271 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 C5orf49A4QMS7 147 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 UNC119BA6NIH7 251 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 C12orf71A8MTZ7 269 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 A8MV72 311 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 DYNC1I1O14576 645 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 FFAR1O14842 300 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 CD5LO43866 347 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 GPRIN2O60269 458 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 OR10H3O60404 316 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 GADD45GO95257 159 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 IGHMP01871 453 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 CD14P08571 375 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 MSR1P21757 451 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 STOMP27105 288 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 NOS3P29474 1203 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 CDAP32320 146 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 EVX1P49640 407 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 GZMKP49863 264 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 RPS6KA3P51812 740 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 ARHGDIAP52565 204 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 KLF3P57682 345 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 LOXL1Q08397 574 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 MST1LQ2TV78 715 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TMEM249Q2WGJ8 235 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 SPATS1Q496A3 300 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 PABPC1L2AQ5JQF8 200 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 C10orf128Q5T292 105 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 CYB5R2Q6BCY4 276 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 GPR139Q6DWJ6 353 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 C8orf82Q6P1X6 216 aaPredicted RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 PODNL1Q6PEZ8 512 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 DNM1P34Q6PK57 102 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TBPL2Q6SJ96 375 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 NHLRC1Q6VVB1 395 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TMPRSS11FQ6ZWK6 438 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 JAZF1Q86VZ6 243 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 WDFY1Q8IWB7 410 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 DEFB107AQ8IZN7 70 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 ARIH2OSQ8N7S6 290 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 FAM156AQ8NDB6 213 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 OR10H5Q8NGA6 315 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 SYNPRQ8TBG9 265 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 FANK1Q8TC84 345 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 HDAC2Q92769 488 aaKnown RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 RSRC1Q96IZ7 334 aaKnown RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 LRGUKQ96M69 825 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TSPAN32Q96QS1 320 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 KCNK17Q96T54 332 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 MRPL13Q9BYD1 178 aaKnown RBP7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TPK1Q9H3S4 243 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 GORASP2Q9H8Y8 452 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 MAN2C1Q9NTJ4 1040 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 SLCO1C1Q9NYB5 712 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 NDUFAF4Q9P032 175 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 TIMM10BQ9Y5J6 103 aa7.88□□□□□ -1.15
HDAC6-232ENST00000489053 ATRQ13535 2644 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 SONP18583 2426 aaKnown RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 B2RBV5 119 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 H7C1C5 153 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ARPC2O15144 300 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 AHCYL1O43865 530 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 DIRAS1O95057 198 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 IFNA2P01563 188 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 CST2P09228 141 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 CCL2P13500 99 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF35P13682 527 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 HSD17B1P14061 328 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 ZNF32P17041 273 aa7.87□□□□□ -1.15
HDAC6-232ENST00000489053 HOXB4P17483 251 aaPredicted RBP7.87□□□□□ -1.15
HDAC6-232ENST00000489053 HNF1AP20823 631 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms