RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 SIAEQ9HAT2 523 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 MOV10Q9HCE1 1003 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 SRA1Q9HD15 236 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 NGBQ9NPG2 151 aa16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 RPRD1BQ9NQG5 326 aaKnown RBP16.95■□□□□ 0.3
PCOLCE-208ENST00000487172 IGLV1-36A0A0B4J1U3 117 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 SEC14L2O76054 403 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 GOSR1O95249 250 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 FARS2O95363 451 aaKnown RBP16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 WNT11O96014 354 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 B4GALT1P15291 398 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 PEX2P28328 305 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 LAP3P28838 519 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 GUCA1AP43080 201 aaPredicted RBP16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 FAM27BQ5VT28 67 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 C12orf73Q69YU5 71 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 SEZ6L2Q6UXD5 910 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 DPPA2Q7Z7J5 298 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 CYB561A3Q8NBI2 242 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 OR2T4Q8NH00 348 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 OR52N5Q8NH56 324 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 ZC3HAV1LQ96H79 300 aaKnown RBP16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 WACQ9BTA9 647 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 GRIP2Q9C0E4 1043 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 RIBC2Q9H4K1 309 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 TVP23BQ9NYZ1 205 aa16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 COA3Q9Y2R0 106 aaPredicted RBP16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 RRP15Q9Y3B9 282 aaKnown RBP16.94■□□□□ 0.3
PCOLCE-208ENST00000487172 EFNB1P98172 346 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 SNAPC1Q16533 368 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 GLB1L2Q8IW92 636 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 SKA3Q8IX90 412 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 FAM169BQ8N8A8 192 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 NANOS1Q8WY41 292 aaKnown RBP16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 PTP4A1Q93096 173 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 HRASLS5Q96KN8 279 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 FN3KQ9H479 309 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 SEC61A2Q9H9S3 476 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 POLE4Q9NR33 117 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 B3GNT2Q9NY97 397 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 ZNF224Q9NZL3 707 aa16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 USP9YO00507 2555 aaPredicted RBP16.93■□□□□ 0.3
PCOLCE-208ENST00000487172 DLGAP1O14490 977 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 UBL3O95164 117 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 MSR1P21757 451 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 CDAP32320 146 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 CENPAP49450 140 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 KCNMB1Q16558 191 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 LRRC36Q1X8D7 754 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 C3orf36Q3SXR2 165 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 ZIK1Q3SY52 487 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 WFDC8Q8IUA0 241 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 PLEKHA8Q96JA3 519 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 TOR3AQ9H497 397 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 RERGLQ9H628 205 aa16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 SMPD3Q9NY59 655 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 CRNNQ9UBG3 495 aaPredicted RBP16.92■□□□□ 0.3
PCOLCE-208ENST00000487172 A0A1W2PPL8 197 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 A0A1W2PR80 420 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 FAM221AA4D161 298 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 PRR23D1E9PI22 279 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SNAP29O95721 258 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 CST2P09228 141 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 PRR23D2P0DMB1 279 aaPredicted RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 CBR1P16152 277 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SPI1P17947 270 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 PAICSP22234 425 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 PTDSS1P48651 473 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 LSM6P62312 80 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 HSF2Q03933 536 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 GLO1Q04760 184 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SGCAQ16586 387 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC16A14Q7RTX9 510 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SYT9Q86SS6 491 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 GALNT4Q8N4A0 578 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 C14orf79Q96F83 325 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 MBOAT4Q96T53 435 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SH3GL3Q99963 347 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 KCNN2Q9H2S1 579 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 HINT3Q9NQE9 182 aaKnown RBP16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 NPAP1Q9NZP6 1156 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 MOKQ9UQ07 419 aa16.91■□□□□ 0.3
PCOLCE-208ENST00000487172 SPTAN1Q13813 2472 aaKnown RBP16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 ZNF503-AS2A6NEH8 195 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 FAM183AA6NL82 134 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC16A6O15403 523 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 IGKV3-15P01624 115 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 HRGP04196 525 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 SCG5P05408 212 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 GAAP10253 952 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 ARR3P36575 388 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 BLVRAP53004 296 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC36A2Q495M3 483 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 BEX5Q5H9J7 111 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 PLBD1Q6P4A8 553 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 CPOQ8IVL8 374 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 LRRC18Q8N456 261 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 SLC26A10Q8NG04 563 aa16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 TRUB1Q8WWH5 349 aaKnown RBP16.9■□□□□ 0.3
PCOLCE-208ENST00000487172 NDRG4Q9ULP0 352 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms