RNA–Protein interactions for RNA: ENST00000486720.1

APH1A-208, Transcript of aph-1 homolog A, gamma-secretase subunit, human

TSL 2

Gene APH1A, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APH1A-208	ENST00000486720	UBL3	O95164	117 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	THBD	P07204	575 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	MSR1	P21757	451 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	CRYGS	P22914	178 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	PEX2	P28328	305 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	LAP3	P28838	519 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	CAPZA2	P47755	286 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	CENPA	P49450	140 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	GLO1	Q04760	184 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	DAZAP2	Q15038	168 aa	Predicted RBP	12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	SNAPC1	Q16533	368 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	SGCA	Q16586	387 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	SLC36A2	Q495M3	483 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	FAM27B	Q5VT28	67 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	LPCAT4	Q643R3	524 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	ZBTB46	Q86UZ6	589 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	OR6V1	Q8N148	313 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	WDR31	Q8NA23	367 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	CYB561A3	Q8NBI2	242 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	DDO	Q99489	341 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	WAC	Q9BTA9	647 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	FN3K	Q9H479	309 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	SRA1	Q9HD15	236 aa	Known RBP	12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	TVP23B	Q9NYZ1	205 aa		12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	COA3	Q9Y2R0	106 aa	Predicted RBP	12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	GCN1	Q92616	2671 aa	Known RBP	12.83	□□□□□ -0.36
APH1A-208	ENST00000486720	IGLV1-36	A0A0B4J1U3	117 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	PRR23D1	E9PI22	279 aa	Predicted RBP	12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	COL8A1	P27658	744 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	BLVRA	P53004	296 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	ETFDH	Q16134	617 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	LRRC36	Q1X8D7	754 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	BEX5	Q5H9J7	111 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	C12orf73	Q69YU5	71 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	ALKBH2	Q6NS38	261 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	SLC16A14	Q7RTX9	510 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	FAM169B	Q8N8A8	192 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	PROKR2	Q8NFJ6	384 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	NABP1	Q96AH0	204 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	TSSK2	Q96PF2	358 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	NMNAT2	Q9BZQ4	307 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	GRIP2	Q9C0E4	1043 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	POLE4	Q9NR33	117 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	SMPD3	Q9NY59	655 aa	Predicted RBP	12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	FBXL3	Q9UKT7	428 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	LRRK2	Q5S007	2527 aa		12.82	□□□□□ -0.36
APH1A-208	ENST00000486720	SPTBN1	Q01082	2364 aa	Known RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720		A0A1W2PR80	420 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	DCTN6	O00399	190 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CST2	P09228	141 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CD79A	P11912	226 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CBR1	P16152	277 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	EPHA2	P29317	976 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CDA	P32320	146 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	ARR3	P36575	388 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	POLR2I	P36954	125 aa	Known RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	PTDSS1	P48651	473 aa	Known RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	NR1H2	P55055	460 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CDC42	P60953	191 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	PCBD1	P61457	104 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	LSM6	P62312	80 aa	Known RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	GSG1	Q2KHT4	349 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	C3orf36	Q3SXR2	165 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	ZIK1	Q3SY52	487 aa	Predicted RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	TMEM53	Q6P2H8	277 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	C22orf34	Q6ZV56	151 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	SKA3	Q8IX90	412 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	GALNT4	Q8N4A0	578 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	OR9Q1	Q8NGQ5	310 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	OTULIN	Q96BN8	352 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	HRASLS5	Q96KN8	279 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	VCX3B	Q9H321	246 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	TOR3A	Q9H497	397 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	ESRP2	Q9H6T0	727 aa	Known RBP	12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	CCNB1IP1	Q9NPC3	277 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720	MOK	Q9UQ07	419 aa		12.81	□□□□□ -0.36
APH1A-208	ENST00000486720		A6NNC1	897 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	C12orf71	A8MTZ7	269 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	PRODH	O43272	600 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	ATP6V1G2	O95670	118 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	SNAP29	O95721	258 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	RAB36	O95755	333 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	HLA-H	P01893	362 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	HLA-DQA2	P01906	255 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	HRG	P04196	525 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	SPI1	P17947	270 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	HSF2	Q03933	536 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	KCNMB1	Q16558	191 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	PLBD1	Q6P4A8	553 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	TMEM108	Q6UXF1	575 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	CXXC5	Q7LFL8	322 aa	Known RBP	12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	SYT9	Q86SS6	491 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	LRRC18	Q8N456	261 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	ZNF555	Q8NEP9	628 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	OR10H5	Q8NGA6	315 aa		12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	TRUB1	Q8WWH5	349 aa	Known RBP	12.8	□□□□□ -0.36
APH1A-208	ENST00000486720	C14orf79	Q96F83	325 aa		12.8	□□□□□ -0.36

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