RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TMEM116Q8NCL8 245 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 FAM213BQ8TBF2 198 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 B3GNT5Q9BYG0 378 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CSNK1G1Q9HCP0 422 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 EHFQ9NZC4 300 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 N4BP2Q86UW6 1770 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 ZNF608Q9ULD9 1512 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 A0A1B0GV72 72 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ZNF623O75123 536 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MAFO75444 373 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 SLC5A2P31639 672 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR1D2P34982 312 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SRYQ05066 204 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 TAF10Q12962 218 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SHEQ5VZ18 495 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 FAM109BQ6ICB4 259 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 SLC16A12Q6ZSM3 486 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MRGPRGQ86SM5 289 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CALHM3Q86XJ0 350 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 LGI3Q8N145 548 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR2AK2Q8NG84 335 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR1N2Q8NGR9 330 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PMCHL2Q9BQD1 86 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 THAP7Q9BT49 309 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MED9Q9NWA0 146 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CLEC1BQ9P126 229 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 BTRCQ9Y297 605 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ANTXRLA6NF34 631 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 LINC00587B1AMM8 73 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ZNF814B7Z6K7 855 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 DCTN6O00399 190 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CTDSP2O14595 271 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 S1PR2O95136 353 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 FURINP09958 794 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PGGT1BP53609 377 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 RNPS1Q15287 305 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 NPSR1Q6W5P4 371 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 LHFPL2Q6ZUX7 228 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR6Q1Q8NGQ2 317 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 IL1F10Q8WWZ1 152 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 RAB1CQ92928 201 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 EAF2Q96CJ1 260 aaPredicted RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 MCHR1Q99705 422 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 BABAM2Q9NXR7 383 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PURGQ9UJV8 347 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 CACNA1CQ13936 2221 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ANKRD63C9JTQ0 380 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MPC1LP0DKB6 136 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SYN1P17600 705 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 NUTF2P61970 127 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 GAB1Q13480 694 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OVCH2Q7RTZ1 564 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SCD5Q86SK9 330 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ZNF687Q8N1G0 1237 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 NUP43Q8NFH3 380 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR5D13Q8NGL4 314 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 VSTM2AQ8TAG5 236 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 UTP4Q969X6 686 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 ADTRPQ96IZ2 230 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 JMJD8Q96S16 334 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OSGIN2Q9Y236 505 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CPQQ9Y646 472 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 TRGV10A0A0A0MS01 117 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 GABRA3P34903 492 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CPOXP36551 454 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 GPR3P46089 330 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OPCMLQ14982 345 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CHADLQ6NUI6 762 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PWWP2BQ6NUJ5 590 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 GPR153Q6NV75 609 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 KMT5CQ86Y97 462 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 NRIP3Q9NQ35 241 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 HRASLS2Q9NWW9 162 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PSG11Q9UQ72 335 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PIGLQ9Y2B2 252 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 U3KQV3 271 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MROH2AA6NES4 1674 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MYO7BQ6PIF6 2116 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 TSPAN12O95859 305 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 GLRA1P23415 457 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CD200P41217 278 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 HBA1P69905 142 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ILKQ13418 452 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ELAVL3Q14576 367 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 KIR2DS3Q14952 304 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR8G1Q15617 311 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MIDNQ504T8 468 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 C18orf63Q68DL7 685 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MAP4K3Q8IVH8 894 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 OR1K1Q8NGR3 316 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 ESAMQ96AP7 390 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 MRPS24Q96EL2 167 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 DMRTB1Q96MA1 342 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SORBS1Q9BX66 1292 aaKnown RBP5.03□□□□□ -1.6
USF3-202ENST00000478658 TMEM191AQ9H0A3 160 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 PELI2Q9HAT8 420 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 BPIFA1Q9NP55 256 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 SEMA4GQ9NTN9 838 aa5.03□□□□□ -1.6
USF3-202ENST00000478658 CYB5R1Q9UHQ9 305 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms