RNA–Protein interactions for RNA: ENST00000478061.5

RBM28-204, Transcript of RNA binding motif protein 28, human

TSL 3

Gene RBM28, Length 932 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-204	ENST00000478061	CBR1	P16152	277 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	NPR2	P20594	1047 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	IGFBP5	P24593	272 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CRABP1	P29762	137 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	GRK5	P34947	590 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CAPZA2	P47755	286 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CRISP1	P54107	249 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	NR1H2	P55055	460 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	ESRRG	P62508	458 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	PPP2R2B	Q00005	443 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CDK5	Q00535	292 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	BSPH1	Q075Z2	132 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	DBP	Q10586	325 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SGCA	Q16586	387 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	NCMAP	Q5T1S8	102 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SLC27A4	Q6P1M0	643 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	MDP1	Q86V88	176 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	OR6V1	Q8N148	313 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	FAM169B	Q8N8A8	192 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CYB561A3	Q8NBI2	242 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SLC37A3	Q8NCC5	494 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	RBM4B	Q9BQ04	359 aa	Known RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	RBM4	Q9BWF3	364 aa	Known RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	OSBPL10	Q9BXB5	764 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	FN3K	Q9H479	309 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	RERGL	Q9H628	205 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	ESRP2	Q9H6T0	727 aa	Known RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SEC61A2	Q9H9S3	476 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SIAE	Q9HAT2	523 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	NOX3	Q9HBY0	568 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	SLC25A19	Q9HC21	320 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	RPRD1B	Q9NQG5	326 aa	Known RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CMC2	Q9NRP2	79 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CRNN	Q9UBG3	495 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	KLHL21	Q9UJP4	597 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	B9D1	Q9UPM9	204 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	COA3	Q9Y2R0	106 aa	Predicted RBP	11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	ROS1	P08922	2347 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	CACNA1D	Q01668	2161 aa		11.16	□□□□□ -0.62
RBM28-204	ENST00000478061	RIIAD1	A6NNX1	92 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061		M0R1B8	84 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	EI24	O14681	340 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	MGRN1	O60291	552 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	IFNG	P01579	166 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	IGLV1-44	P01699	117 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	ALPL	P05186	524 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	SCG5	P05408	212 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	CD79A	P11912	226 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	MSR1	P21757	451 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	PAX7	P23759	505 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	CD40	P25942	277 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	EPHA2	P29317	976 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	KRTAP10-9	P60411	292 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	ELF3	P78545	371 aa	Predicted RBP	11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	DAG1	Q14118	895 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	CRMP1	Q14194	572 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	RCN1	Q15293	331 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	GSG1	Q2KHT4	349 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	FAM27B	Q5VT28	67 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	TMEM236	Q5W0B7	351 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	FBXW10	Q5XX13	1052 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	TMEM108	Q6UXF1	575 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	ZBTB46	Q86UZ6	589 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	TMEM200A	Q86VY9	491 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	GLB1L2	Q8IW92	636 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	CBR4	Q8N4T8	237 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	NANOS1	Q8WY41	292 aa	Known RBP	11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	FOXN4	Q96NZ1	517 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	SLC38A2	Q96QD8	506 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	TMEM204	Q9BSN7	226 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	MOV10	Q9HCE1	1003 aa	Known RBP	11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	SRA1	Q9HD15	236 aa	Known RBP	11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	POLE4	Q9NR33	117 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	USE1	Q9NZ43	259 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	FKBP7	Q9Y680	259 aa		11.15	□□□□□ -0.62
RBM28-204	ENST00000478061	ABCA12	Q86UK0	2595 aa		11.15	□□□□□ -0.63
RBM28-204	ENST00000478061	NBPF19	A0A087WUL8	3843 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	IGHV1-18	A0A0C4DH31	117 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	UBL3	O95164	117 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	MPZL1	O95297	269 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	PLAU	P00749	431 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	IGKV3-15	P01624	115 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	HMGN1	P05114	100 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	CELA3B	P08861	270 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	MMP7	P09237	267 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	ANPEP	P15144	967 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	PTAFR	P25105	342 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	LAP3	P28838	519 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	ARR3	P36575	388 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	GUCA1A	P43080	201 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	IDH3G	P51553	393 aa	Predicted RBP	11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	SLC25A1	P53007	311 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	RAB1A	P62820	205 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	PIGF	Q07326	219 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	PTGES3	Q15185	160 aa	Known RBP	11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	C3orf36	Q3SXR2	165 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	DNM1P34	Q6PK57	102 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	UGT2A3	Q6UWM9	527 aa		11.14	□□□□□ -0.63
RBM28-204	ENST00000478061	SLC16A14	Q7RTX9	510 aa		11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms