RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ACTA2P62736 377 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 ACTG2P63267 376 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 ACTC1P68032 377 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 ACTA1P68133 377 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 ADARB1P78563 741 aaKnown RBP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 SLC7A9P82251 487 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 BEX3Q00994 111 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 GBE1Q04446 702 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 HSP90AB3PQ58FF7 597 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CARD17Q5XLA6 110 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 HDDC2Q7Z4H3 204 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 CTAGE6Q86UF2 777 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 SAXO1Q8IYX7 474 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 Q8N976 141 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 LRRC58Q96CX6 371 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 GSDMAQ96QA5 445 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 MRPL37Q9BZE1 423 aaKnown RBP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 PLA2G2FQ9BZM2 168 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 FAM192AQ9GZU8 254 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 VCXQ9H320 206 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 TPK1Q9H3S4 243 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 LHX9Q9NQ69 397 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 UXTQ9UBK9 157 aaPredicted RBP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 OR12D3Q9UGF7 316 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 LSM7Q9UK45 103 aaKnown RBP2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 TBX21Q9UL17 535 aa2.91□□□□□ -1.94
SMNDC1-205ENST00000477763 NSD2O96028 1365 aa2.9□□□□□ -1.94
SMNDC1-205ENST00000477763 WDR62O43379 1518 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 F6UB75 175 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 CD5LO43866 347 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ERLIN1O75477 346 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 PRB2P02812 416 aaPredicted RBP2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 IGKV3-11P04433 115 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ANXA5P08758 320 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 RRM2P31350 389 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 HRH1P35367 487 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ATP5OP48047 213 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 TMED10P49755 219 aaKnown RBP2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 PPOXP50336 477 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 PRMT2P55345 433 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 EIF4EBP2Q13542 120 aaPredicted RBP2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 CUL2Q13617 745 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 RCN1Q15293 331 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 CAVIN4Q5BKX8 364 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 HES5Q5TA89 166 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ANKRD22Q5VYY1 191 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 SASS6Q6UVJ0 657 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ANGPTL8Q6UXH0 198 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 CERS6Q6ZMG9 384 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 BBS5Q8N3I7 341 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 OR10G4Q8NGN3 311 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 OR4S2Q8NH73 311 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ZNF502Q8TBZ5 544 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC7A13Q8TCU3 470 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ZFP90Q8TF47 636 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 KIFAP3Q92845 792 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC38A4Q969I6 547 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 FAM3DQ96BQ1 224 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 BMFQ96LC9 184 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 FOPNLQ96NB1 174 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 SERPINB12Q96P63 405 aa2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 FGF20Q9NP95 211 aaPredicted RBP2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 ZNF629Q9UEG4 869 aaPredicted RBP2.9□□□□□ -1.95
SMNDC1-205ENST00000477763 PIK3R4Q99570 1358 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 ANKRD63C9JTQ0 380 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 LSM1O15116 133 aaKnown RBP2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 ANGPTL7O43827 346 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 NEMFO60524 1076 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 MED6O75586 246 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 OR2J3O76001 311 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 UTS2O95399 124 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 AIFM1O95831 613 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 FTH1P02794 183 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 RETP07949 1114 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 RFX3P48380 749 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 SRSF5Q13243 272 aaKnown RBP2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 GINS1Q14691 196 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 PON3Q15166 354 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 UBE2SQ16763 222 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 C9orf135Q5VTT2 229 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 OR52W1Q6IF63 320 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 METAP1DQ6UB28 335 aaPredicted RBP2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 TEX43Q6ZNM6 134 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 IQCF2Q8IXL9 164 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 TTC5Q8N0Z6 440 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 FBXL13Q8NEE6 735 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 OR4C5Q8NGB2 326 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 ACMSDQ8TDX5 336 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 STARD8Q92502 1023 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 STARD4Q96DR4 205 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 SLC29A1Q99808 456 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 RACGAP1Q9H0H5 632 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 PITPNC1Q9UKF7 332 aa2.89□□□□□ -1.95
SMNDC1-205ENST00000477763 TRBV11-1A0A0K0K1C0 115 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 GLYATL1P3A0A0U1RQE8 302 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 ZNF816-ZNF321PA0A0X1KG74 233 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 SMCO2A6NFE2 343 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 H0YHG0 523 aa2.88□□□□□ -1.95
SMNDC1-205ENST00000477763 KRT14P02533 472 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms