RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 CUTCQ9NTM9 273 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SLC23A2Q9UGH3 650 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 PRG3Q9Y2Y8 225 aaPredicted RBP12.57□□□□□ -0.4
HDAC1-206ENST00000476391 OR51B4Q9Y5P0 310 aa12.57□□□□□ -0.4
HDAC1-206ENST00000476391 SLC5A10A0PJK1 596 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF724A8MTY0 619 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 PRAMEF26H0Y7S4 382 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 OR2C1O95371 312 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 PTBP3O95758 552 aaKnown RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 SERPINA5P05154 406 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 LYL1P12980 280 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 CORO1AP31146 461 aaKnown RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 TAS2R38P59533 333 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 AGERQ15109 404 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 BIVMQ86UB2 503 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 CDK20Q8IZL9 346 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ARL14Q8N4G2 192 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF775Q96BV0 537 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ARMC5Q96C12 935 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 F2RL3Q96RI0 385 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 C20orf24Q9BUV8 137 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 CLDND1Q9NY35 253 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 PPIL1Q9Y3C6 166 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 A0A087WUJ7 227 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 C5orf51A6NDU8 294 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 OR2AG2A6NM03 316 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 TAAR5O14804 337 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 PRICKLE3O43900 615 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ADAP1O75689 374 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 C1orf105O95561 183 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF84P51523 738 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ELOCQ15369 112 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ARHGAP11AQ6P4F7 1023 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF467Q7Z7K2 595 aaPredicted RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 ZDHHC22Q8N966 263 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 M1APQ8TC57 530 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 TMEM239Q8WW34 195 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 GPR61Q9BZJ8 451 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 RAB33BQ9H082 229 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 TAF9BQ9HBM6 251 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 OR2S2Q9NQN1 319 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 SIRT7Q9NRC8 400 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 VSIG4Q9Y279 399 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 MRPS33Q9Y291 106 aaKnown RBP12.56□□□□□ -0.4
HDAC1-206ENST00000476391 KCNE3Q9Y6H6 103 aa12.56□□□□□ -0.4
HDAC1-206ENST00000476391 M0QYG6 137 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 PSMD9O00233 223 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 CYB5AP00167 134 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 PTNP21246 168 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 NANOS3P60323 173 aaKnown RBP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 RPS23P62266 143 aaKnown RBP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 SNRPNP63162 240 aaKnown RBP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 TMEM150AQ86TG1 271 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 OR56A1Q8NGH5 318 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 OR10J5Q8NHC4 309 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 GAL3ST3Q96A11 431 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 SEH1LQ96EE3 360 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 PRRT1Q99946 306 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 PRSS16Q9NQE7 514 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 C20orf141Q9NUB4 165 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 TRPV2Q9Y5S1 764 aa12.55□□□□□ -0.4
HDAC1-206ENST00000476391 MTCL1Q9Y4B5 1905 aaKnown RBP12.55□□□□□ -0.4
HDAC1-206ENST00000476391 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 ZNF736B4DX44 427 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 UMAD1C9J7I0 102 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 M0QZ92 97 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 TSPAN6O43657 245 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 DUS4LO95620 317 aaKnown RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 TBX6O95947 436 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 SFTPBP07988 381 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 SOD3P08294 240 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR8U9P0C7N5 309 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 FGF7P21781 194 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 G0S2P27469 103 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 NAA10P41227 235 aaPredicted RBP12.54□□□□□ -0.4
HDAC1-206ENST00000476391 EFNB2P52799 333 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 SCGB2B2Q4G0G5 96 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 C14orf28Q4W4Y0 310 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 Q6ZRG5 221 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 GKN2Q86XP6 184 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 PRR18Q8N4B5 295 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR13C2Q8NGS9 318 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR8U1Q8NH10 309 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 PFN4Q8NHR9 129 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 OR7D2Q96RA2 312 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 CST11Q9H112 138 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 CCDC187A0A096LP49 1063 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BKO60814 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 STC2O76061 302 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BJP06899 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BOP23527 126 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 TACR3P29371 465 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 NTSP30990 170 aa12.54□□□□□ -0.4
HDAC1-206ENST00000476391 HIST1H2BBP33778 126 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms