RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 BCL2L10Q9HD36 194 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 DCAF16Q9NXF7 216 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 GLTPQ9NZD2 209 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 LGALS13Q9UHV8 139 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 HAO1Q9UJM8 370 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 RAP2CQ9Y3L5 183 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 NPTNQ9Y639 398 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 TANC2Q9HCD6 1990 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 DNAH7Q8WXX0 4024 aa4.32□□□□□ -1.72
SNRNP40-204ENST00000474025 NOTCH3Q9UM47 2321 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 MDFIC2A0A1B0GVS7 189 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 A0A1B0GX12 115 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PLSCR5A0PG75 271 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 A6NHS1 94 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 C11orf98E9PRG8 122 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 M0QZ24 198 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SDHDO14521 159 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TIMM23O14925 209 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 DHHO43323 396 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 FARS2O95363 451 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 GPANK1O95872 356 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PLATP00750 562 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PTHP01270 115 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 CD55P08174 381 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 MMP7P09237 267 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SBK2P0C263 348 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ZCCHC18P0CG32 403 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PGA4P0DJD7 388 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PGA3P0DJD8 388 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ADORA3P0DMS8 318 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PPIAL4GP0DN37 164 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ETS2P15036 469 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 AHCYP23526 432 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PRKAR1BP31321 381 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 CD80P33681 288 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PCGF2P35227 344 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 WNT5AP41221 380 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 MTNR1AP48039 350 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC6A9P48067 706 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 RPL14P50914 215 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 RAG2P55895 527 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 KRTAP10-3P60369 221 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ABCE1P61221 599 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PAX2Q02962 417 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PAX8Q06710 450 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC36A2Q495M3 483 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 NRN1LQ496H8 165 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM155Q4W5P6 130 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 THEM4Q5T1C6 240 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 MBNL2Q5VZF2 373 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OLFML2AQ68BL7 652 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM53Q6P2H8 277 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ULK3Q6PHR2 472 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 C17orf107Q6ZR85 190 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC35D2Q76EJ3 337 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC16A14Q7RTX9 510 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 REC114Q7Z4M0 266 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 DPPA2Q7Z7J5 298 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 NUDCD3Q8IVD9 361 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF101Q8IZC7 436 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SPICQ8N5J4 248 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF283Q8N7M2 679 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 EIF1ADQ8N9N8 165 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 RBM15BQ8NDT2 890 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OR52E2Q8NGJ4 325 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OR1J2Q8NGS2 313 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OR5J2Q8NH18 312 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OR4F5Q8NH21 305 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 BBS10Q8TAM1 723 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 KLF14Q8TD94 323 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ZNF566Q969W8 418 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 DACT3Q96B18 629 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 UPRTQ96BW1 309 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC47A1Q96FL8 570 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SLC25A44Q96H78 314 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SIGLEC11Q96RL6 698 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 CCT8L2Q96SF2 557 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 DIRC2Q96SL1 478 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 ZBTB18Q99592 522 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 WFDC6Q9BQY6 131 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TMEM43Q9BTV4 400 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 RSRP1Q9BUV0 290 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 SSBP4Q9BWG4 385 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 OR2J1Q9GZK6 312 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 EGLN1Q9GZT9 426 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 LRMDAQ9H2I8 198 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 RNF121Q9H920 327 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 PATZ1Q9HBE1 687 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 BEX1Q9HBH7 125 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 A4GALTQ9NPC4 353 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 THUMPD1Q9NXG2 353 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 C1RLQ9NZP8 487 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 CGGBP1Q9UFW8 167 aaPredicted RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TESQ9UGI8 421 aaKnown RBP4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 KLHL21Q9UJP4 597 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 TRIM33Q9UPN9 1127 aa4.31□□□□□ -1.72
SNRNP40-204ENST00000474025 LOC100509620A0A075B734 347 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms