RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CPEB2Q7Z5Q1 589 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZER1Q7Z7L7 766 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 LRRC28Q86X40 367 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 NKAIN4Q8IVV8 208 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ENTHD1Q8IYW4 607 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF567Q8N184 647 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM89BQ8N5H3 189 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 MS4A15Q8N5U1 240 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 LRTM2Q8N967 370 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 WDSUB1Q8N9V3 476 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ATP6V1C2Q8NEY4 427 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPRC5AQ8NFJ5 357 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR5AP2Q8NGF4 316 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR8D4Q8NGM9 314 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR5J2Q8NH18 312 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RNF139Q8WU17 664 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SMAP2Q8WU79 429 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 CHURC1Q8WUH1 139 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PIH1D2Q8WWB5 315 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC5A11Q8WWX8 675 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM190Q8WZ59 177 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 CPNE4Q96A23 557 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SENP8Q96LD8 212 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RBP7Q96R05 134 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR5M11Q96RB7 305 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TSNAXQ99598 290 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PKMYT1Q99640 499 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 NKX3-1Q99801 234 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SSX3Q99909 188 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TBL1YQ9BQ87 522 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TAPBPLQ9BX59 468 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 POLR1EQ9GZS1 481 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPN1Q9HCN4 374 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF275Q9NSD4 429 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 THUMPD1Q9NXG2 353 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 CNIH4Q9P003 139 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PDP1Q9P0J1 537 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 DNAJC15Q9Y5T4 150 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 MYO16Q9Y6X6 1858 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TDRD15B5MCY1 1934 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 MEIKINA0A087WXM9 373 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 LOC285095A0A1B0GVY8 99 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 A0A1W2PQL4 384 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NAP1L6A6NFF2 107 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF729A6NN14 1252 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 C1orf196B1AJZ1 125 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SNURFLB1AK76 121 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 LINC00587B1AMM8 73 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 D6RAR5 112 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TSTD3H0UI37 97 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 KHDRBS3O75525 346 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 REM1O75628 298 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CDRT1O95170 752 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 GOSR1O95249 250 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PTHP01270 115 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 FCER2P06734 321 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SFTPCP11686 197 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CEACAM1P13688 526 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 UGT2B7P16662 529 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 HTR2AP28223 471 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC6A1P30531 599 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 DUTP33316 252 aaKnown RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TGFBR1P36897 503 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CSKP41240 450 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 MATKP42679 507 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SULT1E1P49888 294 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB5CP51148 216 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PLK1P53350 603 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CLDN17P56750 224 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TPI1P60174 286 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SPCS3P61009 180 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PITPNAQ00169 270 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ST3GAL4Q11206 333 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SGCGQ13326 291 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 COTL1Q14019 142 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SMCO1Q147U7 214 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PON3Q15166 354 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 FCN2Q15485 313 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TAF1AQ15573 450 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 STXBP2Q15833 593 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF74Q16587 644 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 GOLGA7BQ2TAP0 167 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TTLL9Q3SXZ7 439 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 NHLRC3Q5JS37 347 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 C9orf50Q5SZB4 431 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 RNLSQ5VYX0 342 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF770Q6IQ21 691 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 LAIR2Q6ISS4 152 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC25A25Q6KCM7 469 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRR5LQ6MZQ0 368 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CNIH2Q6PI25 160 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 CES3Q6UWW8 571 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 FCRLAQ7L513 359 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAM122BQ7Z309 247 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 C12orf29Q8N999 325 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF565Q8N9K5 539 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM178AQ8NBL3 297 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR10G2Q8NGC3 310 aa3.84□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR4C15Q8NGM1 316 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms