RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 MT-ATP6P00846 226 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 MELTFP08582 738 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 CBLP22681 906 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 TUBG1P23258 451 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 STOMP27105 288 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 BIDP55957 195 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 GNB2P62879 340 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 HSF2Q03933 536 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 CDK5R2Q13319 367 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 ZMYND11Q15326 602 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 COX20Q5RI15 118 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 LRFN4Q6PJG9 635 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 PTOV1Q86YD1 416 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 IPCEF1Q8WWN9 437 aaPredicted RBP12.56□□□□□ -0.4
NELFE-204ENST00000436289 GEMIN6Q8WXD5 167 aaKnown RBP12.56□□□□□ -0.4
NELFE-204ENST00000436289 AKTIPQ9H8T0 292 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 TUBG2Q9NRH3 451 aa12.56□□□□□ -0.4
NELFE-204ENST00000436289 DOCK11Q5JSL3 2073 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 IGKV1D-42A0A075B6H8 117 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
NELFE-204ENST00000436289 PIP5K1CO60331 668 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 FSTL3O95633 263 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 BCHEP06276 602 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 CCNOP22674 350 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 ZNF84P51523 738 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 WHAMMP3Q1A5X7 153 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 MTX3Q5HYI7 312 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 BRD3OSQ6XYD6 125 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 GDPGP1Q6ZNW5 385 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 ZSCAN4Q8NAM6 433 aaPredicted RBP12.55□□□□□ -0.4
NELFE-204ENST00000436289 SLC25A40Q8TBP6 338 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 DACT3Q96B18 629 aaPredicted RBP12.55□□□□□ -0.4
NELFE-204ENST00000436289 ARHGDIGQ99819 225 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 OR2J1Q9GZK6 312 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 C16orf95Q9H693 158 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 MAN2C1Q9NTJ4 1040 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 MKS1Q9NXB0 559 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 IL19Q9UHD0 177 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 PPP1R3CQ9UQK1 317 aa12.55□□□□□ -0.4
NELFE-204ENST00000436289 TANC2Q9HCD6 1990 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 NOTCH3Q9UM47 2321 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 A0A1B0GWA3 101 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 CEACAM18A8MTB9 384 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 ICMTO60725 284 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 BGLAPP02818 100 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 MMP7P09237 267 aaPredicted RBP12.54□□□□□ -0.4
NELFE-204ENST00000436289 ADORA3P0DMS8 318 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 MPV17P39210 176 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 CRATP43155 626 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 ARHGDIAP52565 204 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 DSTNP60981 165 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 HOXC5Q00444 222 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 BST1Q10588 318 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 RUSC1-AS1Q66K80 236 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 ARL9Q6T311 187 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 SLC35D2Q76EJ3 337 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 C10orf53Q8N6V4 93 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 NOA1Q8NC60 698 aaKnown RBP12.54□□□□□ -0.4
NELFE-204ENST00000436289 MNS1Q8NEH6 495 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 OR5J2Q8NH18 312 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 POM121L2Q96KW2 1035 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 OR52E6Q96RD3 313 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 BCL2L10Q9HD36 194 aa12.54□□□□□ -0.4
NELFE-204ENST00000436289 CENPBD1B2RD01 187 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 TMEM178BH3BS89 294 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 GPR137BO60478 399 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 C1QCP02747 245 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 LIPFP07098 398 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 QDPRP09417 244 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 RPS2P15880 293 aaKnown RBP12.53□□□□□ -0.4
NELFE-204ENST00000436289 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 GDI2P50395 445 aaKnown RBP12.53□□□□□ -0.4
NELFE-204ENST00000436289 PABPC1L2AQ5JQF8 200 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 SWT1Q5T5J6 900 aaKnown RBP12.53□□□□□ -0.4
NELFE-204ENST00000436289 SLC27A4Q6P1M0 643 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 KLBQ86Z14 1044 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 ALDH16A1Q8IZ83 802 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 ZNF101Q8IZC7 436 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 KIRREL3Q8IZU9 778 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 LRTOMTQ8WZ04 291 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 NEIL1Q96FI4 390 aaPredicted RBP12.53□□□□□ -0.4
NELFE-204ENST00000436289 SIGLEC11Q96RL6 698 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 NUDT16L1Q9BRJ7 211 aaKnown RBP12.53□□□□□ -0.4
NELFE-204ENST00000436289 TMEM43Q9BTV4 400 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 TRIM15Q9C019 465 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 DPAGT1Q9H3H5 408 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 SIAEQ9HAT2 523 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 TMEM27Q9HBJ8 222 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 MSL2Q9HCI7 577 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 DCAF16Q9NXF7 216 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
NELFE-204ENST00000436289 C5orf49A4QMS7 147 aa12.52□□□□□ -0.41
NELFE-204ENST00000436289 P2RY10O00398 339 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms