RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ADAP1O75689 374 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 CNR1P21554 472 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 AGTR1P30556 359 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 EIF2S3LQ2VIR3 472 aaKnown RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 HFEQ30201 348 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 HENMT1Q5T8I9 393 aaKnown RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 MEX3BQ6ZN04 569 aaKnown RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 SSX9Q7RTT3 188 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 FAM122BQ7Z309 247 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 ZAR1Q86SH2 424 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 TPRA1Q86W33 373 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 ATOH1Q92858 354 aaPredicted RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 PHB2Q99623 299 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 DHCR7Q9UBM7 475 aaKnown RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 ZMAT5Q9UDW3 170 aaKnown RBP8.05□□□□□ -1.12
RTN4-206ENST00000394611 OPN4Q9UHM6 478 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 COL6A3P12111 3177 aa8.05□□□□□ -1.12
RTN4-206ENST00000394611 FOXE1O00358 373 aaPredicted RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 EIF3GO75821 320 aaKnown RBP eCLIP8.04□□□□□ -1.124e-6■■■□□ 15.9
RTN4-206ENST00000394611 PAPLNO95428 1278 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ZDHHC11BP0C7U3 371 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 GAAP10253 952 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ZNF10P21506 573 aaPredicted RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 CLDN6P56747 220 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 TRAM1Q15629 374 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 STAC2Q6ZMT1 411 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 PM20D2Q8IYS1 436 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 OR9A4Q8NGU2 314 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 GPR148Q8TDV2 347 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 NXPE3Q969Y0 559 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 FAM3DQ96BQ1 224 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MED18Q9BUE0 208 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 RETREG1Q9H6L5 497 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 GLS2Q9UI32 602 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SHANK1Q9Y566 2161 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 OR8U9P0C7N5 309 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SERPINF1P36955 418 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 CAV2P51636 162 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 GPR143P51810 404 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SKP2Q13309 424 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SPIN3Q5JUX0 258 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 AWAT2Q6E213 333 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ZNF704Q6ZNC4 412 aaPredicted RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 ASPGQ86U10 573 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 KLHDC8BQ8IXV7 354 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 CHCHD4Q8N4Q1 142 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SFT2D1Q8WV19 159 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ARRDC3Q96B67 414 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 THOC3Q96J01 351 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 GUCD1Q96NT3 240 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MS4A4EQ96PG1 132 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ADOQ96SZ5 270 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 WDR76Q9H967 626 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MBNL1Q9NR56 388 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 HRASLS2Q9NWW9 162 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 EMC9Q9Y3B6 208 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MYO16Q9Y6X6 1858 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 PATJQ8NI35 1801 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 XRCC2O43543 280 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ZNF354AO60765 605 aaPredicted RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 TPT1P13693 172 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 AMY2BP19961 511 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 S1PR1P21453 382 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 PRKAR1BP31321 381 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 BTCP35070 178 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MMP15P51511 669 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 PRDX1Q06830 199 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 RIN1Q13671 783 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ACTBL2Q562R1 376 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 CDCP2Q5VXM1 449 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 WDR88Q6ZMY6 472 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 PNLDC1Q8NA58 520 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 ZNF248Q8NDW4 579 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MARCH1Q8TCQ1 289 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SMIM19Q96E16 107 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 SLC41A2Q96JW4 573 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 KLHL15Q96M94 604 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 MAP3K3Q99759 626 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 NXF5Q9H1B4 397 aaKnown RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 SPACA1Q9HBV2 294 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 GHRLQ9UBU3 117 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 KCNG2Q9UJ96 466 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 VDAC3Q9Y277 283 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 AMDHD2Q9Y303 409 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 ARHGEF17Q96PE2 2063 aaPredicted RBP8.04□□□□□ -1.12
RTN4-206ENST00000394611 DOCK8Q8NF50 2099 aa8.04□□□□□ -1.12
RTN4-206ENST00000394611 TRAV8-7A0A075B6U6 113 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 FAM221AA4D161 298 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 QDPRP09417 244 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 RPA2P15927 270 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 ZNF20P17024 532 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 NAGAP17050 411 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 CCR2P41597 374 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 PTGFRP43088 359 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 EMDP50402 254 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 ZNF85Q03923 595 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 DHCR24Q15392 516 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 ZNF660Q6AZW8 331 aaPredicted RBP8.03□□□□□ -1.12
RTN4-206ENST00000394611 KLHL24Q6TFL4 600 aa8.03□□□□□ -1.12
RTN4-206ENST00000394611 ERN2Q76MJ5 926 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms