RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 RGS9O75916 674 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 OCM2P0CE71 109 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 OCMP0CE72 109 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 GAAP10253 952 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 EDNRAP25101 427 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 MAGEA5P43359 124 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 MAGEB1P43366 347 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 GDI2P50395 445 aaKnown RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 TAS2R43P59537 309 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 HSF2Q03933 536 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 GLO1Q04760 184 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 HNRNPA0Q13151 305 aaKnown RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 NEIL3Q8TAT5 605 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 ZNF775Q96BV0 537 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 SMIM19Q96E16 107 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 SLC25A44Q96H78 314 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 ADGRG7Q96K78 797 aa16.4■□□□□ 0.22
USP39-201ENST00000323701 PLEKHB1Q9UF11 243 aaPredicted RBP16.4■□□□□ 0.22
USP39-201ENST00000323701 TRBV2A0A0J9YWF9 115 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 LOC102725191A0A1B0GVB3 256 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 A0A1W2PPK0 400 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 OR5H15A6NDH6 313 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 TRABD2BA6NFA1 517 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 CLDN25C9JDP6 229 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 SMAD9O15198 467 aaKnown RBP16.39■□□□□ 0.21
USP39-201ENST00000323701 IL1AP01583 271 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 SP1P08047 785 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 CLDN17P56750 224 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 LRRN1Q6UXK5 716 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 MFRPQ9BY79 579 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 B3GNT3Q9Y2A9 372 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 ATMQ13315 3056 aa16.39■□□□□ 0.21
USP39-201ENST00000323701 BOLA2-SMG1P6H3BVE0 249 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 NTF4P34130 210 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 CCL11P51671 97 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 SOX8P57073 446 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 RTP5Q14D33 572 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 FAM205BPQ63HN1 556 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 RPL22L1Q6P5R6 122 aaKnown RBP16.38■□□□□ 0.21
USP39-201ENST00000323701 PLXDC2Q6UX71 529 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 CREB3L2Q70SY1 520 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 LINC00346Q8IVM7 164 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 YIPF7Q8N8F6 280 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 ZIC4Q8N9L1 334 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 NOXO1Q8NFA2 376 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 RGP1Q92546 391 aaPredicted RBP16.38■□□□□ 0.21
USP39-201ENST00000323701 MAP6Q96JE9 813 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 IKZF2Q9UKS7 526 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 PAIP2BQ9ULR5 123 aaKnown RBP16.38■□□□□ 0.21
USP39-201ENST00000323701 GSTK1Q9Y2Q3 226 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 MRPS18CQ9Y3D5 142 aaKnown RBP16.38■□□□□ 0.21
USP39-201ENST00000323701 EFSO43281 561 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 NME2P1O60361 137 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 ZFPL1O95159 310 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 NME2P22392 152 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 CDAP32320 146 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 ZNF846Q147U1 533 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 SLC17A1Q14916 467 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 PHYHD1Q5SRE7 291 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 LRFN4Q6PJG9 635 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 CORO6Q6QEF8 472 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 CEACAM19Q7Z692 300 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 TMEM251Q8N6I4 163 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 FDCSPQ8NFU4 85 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 OR6X1Q8NH79 312 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 RPS4Y2Q8TD47 263 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 ORAI1Q96D31 301 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 SMAD5Q99717 465 aaKnown RBP16.38■□□□□ 0.21
USP39-201ENST00000323701 FRRS1LQ9P0K9 344 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 A3GALT2U3KPV4 340 aa16.38■□□□□ 0.21
USP39-201ENST00000323701 DCDC2BA2VCK2 349 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 CXCL13O43927 109 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 ITGB2P05107 769 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 SOX6P35712 828 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 RORCP51449 518 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
USP39-201ENST00000323701 CLRN1P58418 232 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 IFITM3Q01628 133 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 INAQ16352 499 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 RGS21Q2M5E4 152 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 ACSM3Q53FZ2 586 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 HBMQ6B0K9 141 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 KCNE4Q8WWG9 221 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 ROBO4Q8WZ75 1007 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 ZNF845Q96IR2 970 aaPredicted RBP16.37■□□□□ 0.21
USP39-201ENST00000323701 COQ7Q99807 217 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 MED18Q9BUE0 208 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 ABHD6Q9BV23 337 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 SLC6A15Q9H2J7 730 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 RASD1Q9Y272 281 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 FUOMA2VDF0 154 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 EIF1BO60739 113 aaKnown RBP16.37■□□□□ 0.21
USP39-201ENST00000323701 IGHG1P01857 330 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 SPINK2P20155 84 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 MEOX1P50221 254 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 CARD18P57730 90 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 RAC3P60763 192 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 CSNK2A1P68400 391 aaPredicted RBP16.37■□□□□ 0.21
USP39-201ENST00000323701 HIST3H3Q16695 136 aa16.37■□□□□ 0.21
USP39-201ENST00000323701 CCDC58Q4VC31 144 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms