RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KCNAB1Q14722 419 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 SMCO1Q147U7 214 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 RAB11BQ15907 218 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 RNF212Q495C1 297 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 TMEM52BQ4KMG9 183 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 KLHL26Q53HC5 615 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 C9orf152Q5JTZ5 239 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 NKAPLQ5M9Q1 402 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 FAM166AQ6J272 317 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 ZAR1Q86SH2 424 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 SLC25A42Q86VD7 318 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 OR4K17Q8NGC6 315 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 OR2G2Q8NGZ5 317 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 MITD1Q8WV92 249 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 GAL3ST3Q96A11 431 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 RAB11FIP5Q9BXF6 653 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 TRIM2Q9C040 744 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 ATG5Q9H1Y0 275 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 CYTL1Q9NRR1 136 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF107Q9UII5 783 aaPredicted RBP12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 PLEKHA6Q9Y2H5 1048 aa12.24□□□□□ -0.45
RPUSD4-201ENST00000298317 SNRNP200O75643 2136 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 TRBV6-7A0A0A0MS04 114 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 C1orf196B1AJZ1 125 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 DOK2O60496 412 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 FARS2O95363 451 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 LRG1P02750 347 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 CPMP14384 443 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 MUC1P15941 1255 aaPredicted RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 DDX6P26196 483 aaKnown RBP eCLIP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 PEBP1P30086 187 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 TSPAN7P41732 249 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 PPICP45877 212 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 HSD17B7P56937 341 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 CAP1Q01518 475 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 NAA40Q86UY6 237 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 TMEM200AQ86VY9 491 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 BPIFB2Q8N4F0 458 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 DOK4Q8TEW6 326 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 TMED6Q8WW62 240 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 SELENOIQ9C0D9 397 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 COMMD4Q9H0A8 199 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 SLCO5A1Q9H2Y9 848 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 DNAJB12Q9NXW2 375 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF346Q9UL40 294 aaKnown RBP12.23□□□□□ -0.45
RPUSD4-201ENST00000298317 A0A1W2PQ45 241 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 A0A1W2PQY0 241 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF208O43345 1280 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 KCNAB3O43448 404 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 MAP3K8P41279 467 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 EMDP50402 254 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 AIMP2Q13155 320 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 PPP1R1AQ13522 171 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 GXYLT1Q4G148 440 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 LEG1Q6P5S2 330 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 CDC20BQ86Y33 519 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF676Q8N7Q3 588 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 EXD3Q8N9H8 876 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 FOXRED1Q96CU9 486 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ADAD1Q96M93 576 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 MOGAT1Q96PD6 335 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 MKKSQ9NPJ1 570 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SLC2A8Q9NY64 477 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 FAM96BQ9Y3D0 163 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF736B4DX44 427 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 CYB5AP00167 134 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 DCNP07585 359 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 ZNF888P0CJ79 500 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 LIPCP11150 499 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SDHAP31040 664 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SLC25A1P53007 311 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SPCS3P61009 180 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 RPS4XP62701 263 aaKnown RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 VN1R4Q7Z5H5 301 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 GPX7Q96SL4 187 aaPredicted RBP12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SLC6A7Q99884 636 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 TEX101Q9BY14 249 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 SEC61A2Q9H9S3 476 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 RHOFQ9HBH0 211 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 LPAR3Q9UBY5 353 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 MSRAQ9UJ68 235 aa12.22□□□□□ -0.45
RPUSD4-201ENST00000298317 A0A087WV62 115 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 C9orf170A2RU37 121 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 C4orf47A7E2U8 309 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CRHP06850 196 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 AGAP20933 346 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CDKN2AP42771 156 aaKnown RBP12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 CAV2P51636 162 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 RNF4P78317 190 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ELOCQ15369 112 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 SCGB2B2Q4G0G5 96 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ZCCHC12Q6PEW1 402 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 ULK3Q6PHR2 472 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.45
RPUSD4-201ENST00000298317 SSX9Q7RTT3 188 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms