RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 MYL9P24844 172 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 TNFSF10P50591 281 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 NANOS3P60323 173 aaKnown RBP20.21■□□□□ 0.83
CDX1-201ENST00000231656 MYBPHQ13203 477 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 GALNTL5Q7Z4T8 443 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 GTPBP8Q8N3Z3 284 aaPredicted RBP20.21■□□□□ 0.83
CDX1-201ENST00000231656 DIRAS2Q96HU8 199 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 C5orf34Q96MH7 638 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 SMAD5Q99717 465 aaKnown RBP20.21■□□□□ 0.83
CDX1-201ENST00000231656 LAMP5Q9UJQ1 280 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 RPH3AQ9Y2J0 694 aaPredicted RBP20.21■□□□□ 0.83
CDX1-201ENST00000231656 CSAG2Q9Y5P2 127 aa20.21■□□□□ 0.83
CDX1-201ENST00000231656 A0A0G2JK05 382 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 A6NIZ1 184 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 SLC16A7O60669 478 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 TACSTD2P09758 323 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 CTLA4P16410 223 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 SRD5A2P31213 254 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 CENPAP49450 140 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 RAP1BP61224 184 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 RAP1AP62834 184 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 HBMQ6B0K9 141 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 C3orf33Q6P1S2 294 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 UNQ9370/PRO34162Q6UXP9 181 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 DPY19L4Q7Z388 723 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 SCMH1Q96GD3 660 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 UBL7Q96S82 380 aaPredicted RBP20.2■□□□□ 0.82
CDX1-201ENST00000231656 PDCD1LG2Q9BQ51 273 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 SP140LQ9H930 580 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 B3GALT5Q9Y2C3 310 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 TMEM14AQ9Y6G1 99 aa20.2■□□□□ 0.82
CDX1-201ENST00000231656 TNRC6AQ8NDV7 1962 aaKnown RBP20.2■□□□□ 0.82
CDX1-201ENST00000231656 PTPRQQ9UMZ3 2332 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 TRAV1-2A0A0B4J238 106 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 FUOMA2VDF0 154 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 HPGDSO60760 199 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 GATBO75879 557 aaKnown RBP20.19■□□□□ 0.82
CDX1-201ENST00000231656 DAP3P51398 398 aaKnown RBP20.19■□□□□ 0.82
CDX1-201ENST00000231656 BLVRAP53004 296 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 EGR3Q06889 387 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 C19orf57Q0VDD7 668 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 TOMM20Q15388 145 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 ZNF766Q5HY98 468 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 MZT2AQ6P582 158 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 FAM131AQ6UXB0 335 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 FAM220AQ7Z4H9 259 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 WDFY1Q8IWB7 410 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 POC5Q8NA72 575 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 ACOT12Q8WYK0 555 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 TSPAN10Q9H1Z9 355 aaPredicted RBP20.19■□□□□ 0.82
CDX1-201ENST00000231656 C14orf119Q9NWQ9 140 aa20.19■□□□□ 0.82
CDX1-201ENST00000231656 MRPL22Q9NWU5 206 aaKnown RBP20.19■□□□□ 0.82
CDX1-201ENST00000231656 A0A1W2PNV4 684 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 FABP12A6NFH5 140 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 K7ENP7 123 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 KRT8P05787 483 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 UCHL1P09936 223 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 IFNGR1P15260 489 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 THBS2P35442 1172 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 OR10A3P58181 314 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 HSF1Q00613 529 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 MRPL28Q13084 256 aaKnown RBP20.18■□□□□ 0.82
CDX1-201ENST00000231656 LIPNQ5VXI9 398 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 INO80CQ6PI98 192 aaPredicted RBP20.18■□□□□ 0.82
CDX1-201ENST00000231656 XKRXQ6PP77 449 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 TRILQ7L0X0 811 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 OTOSQ8NHW6 89 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 HAVCR2Q8TDQ0 301 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 HSD17B8Q92506 261 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 SOSTQ9BQB4 213 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 RAXQ9Y2V3 346 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 NPIPA5E9PKD4 350 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 KLRC4-KLRK1H3BQV0 150 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 PHYHO14832 338 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 GDF1P27539 372 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 RFC3P40938 356 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 RPS27P42677 84 aaKnown RBP20.18■□□□□ 0.82
CDX1-201ENST00000231656 BCAP31P51572 246 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 ETFDHQ16134 617 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 RAET1LQ5VY80 246 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 NHLRC1Q6VVB1 395 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 OR8H2Q8N162 312 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 YIPF7Q8N8F6 280 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 ADPRHL1Q8NDY3 354 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 RGP1Q92546 391 aaPredicted RBP20.18■□□□□ 0.82
CDX1-201ENST00000231656 MAP6Q96JE9 813 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 AMELYQ99218 206 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 TTYH2Q9BSA4 534 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 KCNG2Q9UJ96 466 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 NPIPA1Q9UND3 350 aa20.18■□□□□ 0.82
CDX1-201ENST00000231656 OR2M5A3KFT3 312 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 PTTG1O95997 202 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 AZGP1P25311 298 aaKnown RBP20.17■□□□□ 0.82
CDX1-201ENST00000231656 MEOX1P50221 254 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 POU3F1Q03052 451 aaPredicted RBP20.17■□□□□ 0.82
CDX1-201ENST00000231656 SELENBP1Q13228 472 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 IDNKQ5T6J7 187 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 FAM205BPQ63HN1 556 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 SFXN4Q6P4A7 337 aa20.17■□□□□ 0.82
CDX1-201ENST00000231656 CNIH2Q6PI25 160 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms