RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 UCN2Q96RP3 112 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 MED18Q9BUE0 208 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 SF3B5Q9BWJ5 86 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 CDADC1Q9BWV3 514 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 NXF2Q9GZY0 626 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 QPCTLQ9NXS2 382 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 CEP295Q9C0D2 2601 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 IGKV1D-43A0A0B4J1Z2 117 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 CLDN25C9JDP6 229 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 PSMD9O00233 223 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 CDRT1O95170 752 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 HRGP04196 525 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 SPARCP09486 303 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 ZNF823P16415 610 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 RPS19P39019 145 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 GDI2P50395 445 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 CLDN17P56750 224 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 SLC17A1Q14916 467 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 ZNF766Q5HY98 468 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 PDSS1Q5T2R2 415 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 CREB3L2Q70SY1 520 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 GLB1L2Q8IW92 636 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 ZNF454Q8N9F8 522 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 OR9K2Q8NGE7 335 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 OR10D3Q8NH80 312 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 DCLRE1CQ96SD1 692 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 TTYH2Q9BSA4 534 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 CCDC86Q9H6F5 360 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 HMG20AQ9NP66 347 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 TIGARQ9NQ88 270 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 KLHL9Q9P2J3 617 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 MRM2Q9UI43 246 aaKnown RBP16.16■□□□□ 0.18
VIM-201ENST00000224237 IKZF2Q9UKS7 526 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 B3GNT3Q9Y2A9 372 aa16.16■□□□□ 0.18
VIM-201ENST00000224237 FRYQ5TBA9 3013 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 TRBV2A0A0J9YWF9 115 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 CD8B2A6NJW9 211 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 FAM166BA8MTA8 275 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 SMAD9O15198 467 aaKnown RBP16.15■□□□□ 0.18
VIM-201ENST00000224237 EFSO43281 561 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 ABHD16AO95870 558 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 OR8G3PP0DMU2 310 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 CD8BP10966 210 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 PSKH1P11801 424 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 EDNRAP25101 427 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 STARP49675 285 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 RORCP51449 518 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 SUCLG1P53597 346 aaKnown RBP16.15■□□□□ 0.18
VIM-201ENST00000224237 ZNF846Q147U1 533 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 HIST3H3Q16695 136 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 C16orf87Q6PH81 154 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 TMEM91Q6ZNR0 172 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.15■□□□□ 0.18
VIM-201ENST00000224237 SLC22A16Q86VW1 577 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 YIPF7Q8N8F6 280 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 ZFP62Q8NB50 900 aaPredicted RBP16.15■□□□□ 0.18
VIM-201ENST00000224237 OR6Q1Q8NGQ2 317 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 NEIL3Q8TAT5 605 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 GHSRQ92847 366 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 LAMA5O15230 3695 aa16.15■□□□□ 0.18
VIM-201ENST00000224237 ZNF12P17014 697 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 OPRL1P41146 370 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 EIF1AXP47813 144 aaKnown RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 TNFSF10P50591 281 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 MEP1BQ16820 701 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 DEFB109BQ30KR1 87 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 TEX30Q5JUR7 227 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 LIPNQ5VXI9 398 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 IGFL2Q6UWQ7 119 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 RPS4Y2Q8TD47 263 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 NSMAFQ92636 917 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 CPNE4Q96A23 557 aaPredicted RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 SLC25A46Q96AG3 418 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 SCNM1Q9BWG6 230 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 WDR12Q9GZL7 423 aaKnown RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 SNTG1Q9NSN8 517 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 ACOT7O00154 380 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 CXCL13O43927 109 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 GPRIN2O60269 458 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 UPK3AO75631 287 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 SC5DO75845 299 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 AQP8O94778 261 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 SERPINA3P01011 423 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 CELA3AP09093 270 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 SDC2P34741 201 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 PSMB10P40306 273 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 INSL4Q14641 139 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 PCK2Q16822 640 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 CARD17Q5XLA6 110 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 KCTD18Q6PI47 426 aaPredicted RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 ABHD4Q8TB40 342 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 OR8B4Q96RC9 309 aa16.14■□□□□ 0.17
VIM-201ENST00000224237 C6orf62Q9GZU0 229 aaPredicted RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 ING1Q9UK53 422 aaPredicted RBP16.14■□□□□ 0.17
VIM-201ENST00000224237 MPZL1O95297 269 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 LAP3P28838 519 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 LHX2P50458 406 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 CLDN15P56746 228 aa16.13■□□□□ 0.17
VIM-201ENST00000224237 PPIAP62937 165 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms