RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 RGS13O14921 159 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 EFNA2O43921 213 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF254O75437 659 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 UBL3O95164 117 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 TRAPPC2P0DI81 140 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 TRAPPC2BP0DI82 140 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ROM1Q03395 351 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 TLE3Q04726 772 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 GLO1Q04760 184 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC17A1Q14916 467 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 MEP1BQ16820 701 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 HACD4Q5VWC8 232 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 SLC35D2Q76EJ3 337 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF679Q8IYX0 411 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 PRSS35Q8N3Z0 413 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 POC1BQ8TC44 478 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 LGALS14Q8TCE9 139 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 C4orf45Q96LM5 186 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ELOVL3Q9HB03 270 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 FANCFQ9NPI8 374 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 PCDHGA9Q9Y5G4 932 aaKnown RBP17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 V9GY05 133 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 NPIPA5E9PKD4 350 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 H3BML4 177 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 KLF7O75840 302 aaPredicted RBP17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 RAF1P04049 648 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 SPARCP09486 303 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 IFNGR1P15260 489 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ADAM8P78325 824 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 UBE2NLQ5JXB2 153 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 OTPQ5XKR4 325 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 BAIAP2L2Q6UXY1 529 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 STAC2Q6ZMT1 411 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF433Q8N7K0 673 aaPredicted RBP17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF676Q8N7Q3 588 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 OR2M3Q8NG83 312 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ULBP3Q9BZM4 244 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF700Q9H0M5 742 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 SLITRK2Q9H156 845 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 TCF7L1Q9HCS4 588 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 ALKBH4Q9NXW9 302 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 CLEC4AQ9UMR7 237 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 NPIPA1Q9UND3 350 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 B3GALT5Q9Y2C3 310 aa17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 PTRH2Q9Y3E5 179 aaKnown RBP17.7■□□□□ 0.42
PCDHB11-202ENST00000624887 A0A0B4J293 547 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 HMX3A6NHT5 357 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 C9J4A7 227 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 FAM47E-STBD1D6RA91 191 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 EEF1E1O43324 174 aaKnown RBP17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 CCR9P51686 369 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 PITPNAQ00169 270 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 HES5Q5TA89 166 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 RSBN1Q5VWQ0 802 aaPredicted RBP17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 FAM205BPQ63HN1 556 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 LRRN1Q6UXK5 716 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 GPR148Q8TDV2 347 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 RNF128Q8TEB7 428 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 IMMP1LQ96LU5 166 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 KCNK17Q96T54 332 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 SERINC1Q9NRX5 453 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 NLKQ9UBE8 527 aa17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 COA3Q9Y2R0 106 aaPredicted RBP17.69■□□□□ 0.42
PCDHB11-202ENST00000624887 DMDP11532 3685 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 TRBV5-7A0A0A0MS05 114 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 KIR3DL2P43630 455 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 SOX2P48431 317 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 MMP15P51511 669 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 HSF1Q00613 529 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 INPP5JQ15735 1006 aaPredicted RBP17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 EXT1Q16394 746 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 WDR38Q5JTN6 314 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 TEX30Q5JUR7 227 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 KCTD18Q6PI47 426 aaPredicted RBP17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 DNM1P34Q6PK57 102 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 GLCCI1Q86VQ1 547 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF454Q8N9F8 522 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 MRI1Q9BV20 369 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 CAMK2AQ9UQM7 478 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 CHCHD2Q9Y6H1 151 aaPredicted RBP17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 FRYLO94915 3013 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 GP1BAP07359 652 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 COX6A1P12074 109 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 PTGS2P35354 604 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 CLDN20P56880 219 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 POU3F1Q03052 451 aaPredicted RBP17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 GPR176Q14439 515 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 C5orf34Q96MH7 638 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 MARVELD1Q9BSK0 173 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 ZNF221Q9UK13 617 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 FBXL2Q9UKC9 423 aa17.68■□□□□ 0.42
PCDHB11-202ENST00000624887 A0A1W2PNV4 684 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 GPR171O14626 319 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 TP53I11O14683 189 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 DPP4P27487 766 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 MPLP40238 635 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 MYBPHQ13203 477 aa17.67■□□□□ 0.42
PCDHB11-202ENST00000624887 SNTA1Q13424 505 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms