RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ZNF43P17038 809 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ALOX5APP20292 161 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GDF1P27539 372 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CD96P40200 585 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CYB561P49447 251 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CLDN17P56750 224 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PSPHP78330 225 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CD300CQ08708 224 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TCF15Q12870 199 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 IL18Q14116 193 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CLPPQ16740 277 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 GFOD2Q3B7J2 385 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CDONQ4KMG0 1287 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ARMC4Q5T2S8 1044 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CNIH2Q6PI25 160 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CD200R1LQ6Q8B3 271 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 DCXRQ7Z4W1 244 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 KRT77Q7Z794 578 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 LYSMD2Q8IV50 215 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SERPINA12Q8IW75 414 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 UEVLDQ8IX04 471 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 IZUMO1Q8IYV9 350 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SAMD12Q8N8I0 201 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MFSD8Q8NHS3 518 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF519Q8TB69 540 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 KLHL15Q96M94 604 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CCNL2Q96S94 520 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 CDC6Q99741 560 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TTYH2Q9BSA4 534 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 C12orf10Q9HB07 376 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MRPL39Q9NYK5 338 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 MYEF2Q9P2K5 600 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 B3GAT1Q9P2W7 334 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 POLR1DQ9Y2S0 133 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 NOX1Q9Y5S8 564 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PIEZO2Q9H5I5 2752 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 DSPP15924 2871 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 CEP295Q9C0D2 2601 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 IGLV1-36A0A0B4J1U3 117 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 A0A0J9YW62 118 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TFECO14948 347 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 NKX2-8O15522 239 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 UPK1BO75841 260 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SULT1C4O75897 302 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 TXNDC12O95881 172 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 APEHP13798 732 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 LIFP15018 202 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MYL9P24844 172 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MSX1P28360 303 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 FGF9P31371 208 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 PRKXP51817 358 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SLC25A1P53007 311 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CLRN1P58418 232 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RPS11P62280 158 aaKnown RBP eCLIP3.07□□□□□ -1.92
LIG4-205ENST00000614526 ACTA2P62736 377 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ACTG2P63267 376 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GALK2Q01415 458 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 GLO1Q04760 184 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF79Q15937 498 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 C3AR1Q16581 482 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SGCAQ16586 387 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.07□□□□□ -1.92
LIG4-205ENST00000614526 SLC35D3Q5M8T2 416 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 DCAF10Q5QP82 559 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 DDI2Q5TDH0 399 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ABHD17BQ5VST6 288 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CCDC190Q86UF4 302 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF227Q86WZ6 799 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CDC20BQ86Y33 519 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 LRRC18Q8N456 261 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 OR5H6Q8NGV6 325 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PAQR8Q8TEZ7 354 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ASB10Q8WXI3 467 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RGP1Q92546 391 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 SMIM19Q96E16 107 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 LIN37Q96GY3 246 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF385AQ96PM9 386 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 DERL3Q96Q80 235 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SDHCQ99643 169 aaPredicted RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 ATF6BQ99941 703 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ABHD6Q9BV23 337 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ANGPTL4Q9BY76 406 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SPRY4Q9C004 299 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 NDEL1Q9GZM8 345 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 NXF2Q9GZY0 626 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 KCNN2Q9H2S1 579 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ISYNA1Q9NPH2 558 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 INPP5EQ9NRR6 644 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF726A6NNF4 738 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 STMND1H3BQB6 276 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PIN1P1O15428 100 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CXCL13O43927 109 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 UPK3AO75631 287 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ITGB2P05107 769 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SERPINA7P05543 415 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 QDPRP09417 244 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 PTHLHP12272 177 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ICAM2P13598 275 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ELK1P19419 428 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 RAB3BP20337 219 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms