RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 OR10H3O60404 316 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 KRT33AO76009 404 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 CCNB2O95067 398 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 HIST1H2ABP04908 130 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 CDH2P19022 906 aaPredicted RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 SLC9A3P48764 834 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 EFNA4P52798 201 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 NUDT6P53370 316 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 CLDN17P56750 224 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 LOXL1Q08397 574 aaPredicted RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 PMS2P3Q13401 168 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 FHL1Q13642 323 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 ANKDD1AQ495B1 522 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 PGBD2Q6P3X8 592 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 SHQ1Q6PI26 577 aaKnown RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 HIST3H2AQ7L7L0 130 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 C10orf53Q8N6V4 93 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 OR5K1Q8NHB7 308 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 ZNF417Q8TAU3 575 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 GNPDA2Q8TDQ7 276 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 GIPC3Q8TF64 312 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 HIST1H2ACQ93077 130 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 FAM46AQ96IP4 442 aaKnown RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 ALKBH3Q96Q83 286 aaPredicted RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 ZNF587Q96SQ5 575 aaPredicted RBP11.61□□□□□ -0.55
CTSA-213ENST00000606782 ASPNQ9BXN1 380 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 SEC14L4Q9UDX3 406 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 MOKQ9UQ07 419 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 PMF1-BGLAPU3KQ54 211 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 STAB1Q9NY15 2570 aa11.61□□□□□ -0.55
CTSA-213ENST00000606782 RTTNQ86VV8 2226 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 ARRDC5A6NEK1 342 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 EFCAB9A8MZ26 197 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 CDC42EP2O14613 210 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 TRAF3IP2O43734 574 aaPredicted RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 SLC43A1O75387 559 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 IGKV3-15P01624 115 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 TP53P04637 393 aaPredicted RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 GTF2E2P29084 291 aaKnown RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 GSSP48637 474 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 ARHGDIAP52565 204 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 UBE2NP61088 152 aaKnown RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 ROR2Q01974 943 aaKnown RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 CLEC2AQ6UVW9 174 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 CD300LDQ6UXZ3 194 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 MEX3DQ86XN8 651 aaKnown RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 HIPK1Q86Z02 1210 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 CCDC36Q8IYA8 594 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 TMEM123Q8N131 208 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 OR9Q2Q8NGE9 314 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 STMN2Q93045 179 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 TNFRSF13CQ96RJ3 184 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 DGCR6LQ9BY27 220 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 GPR35Q9HC97 309 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 KRCC1Q9NPI7 259 aaPredicted RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 PDP1Q9P0J1 537 aaPredicted RBP11.6□□□□□ -0.55
CTSA-213ENST00000606782 HIF3AQ9Y2N7 669 aa11.6□□□□□ -0.55
CTSA-213ENST00000606782 MXRA5Q9NR99 2828 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 E2F6O75461 281 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 HPRP00739 348 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 F12P00748 615 aaPredicted RBP11.59□□□□□ -0.55
CTSA-213ENST00000606782 CRYAAP02489 173 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 CSF3P09919 207 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 CBR1P16152 277 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 SLC25A16P16260 332 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 PRKACGP22612 351 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 FPR3P25089 353 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 GPR4P46093 362 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 ARF1P84077 181 aaKnown RBP11.59□□□□□ -0.55
CTSA-213ENST00000606782 NAAAQ02083 359 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 COX10Q12887 443 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 TSPAN31Q12999 210 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 ZBED5Q49AG3 693 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 PXKQ7Z7A4 578 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 OAFQ86UD1 273 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 PQLC1Q8N2U9 271 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 SVOPLQ8N434 492 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 OR10G2Q8NGC3 310 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 C10orf105Q8TEF2 133 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 LRR1Q96L50 414 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 OR2M2Q96R28 347 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 FEVQ99581 238 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 MDFIQ99750 246 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 SEMA6AQ9H2E6 1030 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 SIGLEC7Q9Y286 467 aa11.59□□□□□ -0.55
CTSA-213ENST00000606782 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
CTSA-213ENST00000606782 UNC119BA6NIH7 251 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 B9A039 149 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 G3V2T6 193 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 BLOC1S5-TXNDC5H3BN57 136 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
CTSA-213ENST00000606782 GPRIN2O60269 458 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 CECR9P0C854 216 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 ADORA3P0DMS8 318 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 SAGP10523 405 aaPredicted RBP11.58□□□□□ -0.56
CTSA-213ENST00000606782 ANXA8P13928 327 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 SERPINF1P36955 418 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 AQP2P41181 271 aa11.58□□□□□ -0.56
CTSA-213ENST00000606782 PUDPQ08623 228 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms