RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 THBS4P35443 961 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 SLC9A3P48764 834 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 TOP3AQ13472 1001 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 SEC23BQ15437 767 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 SPATS1Q496A3 300 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 NRN1LQ496H8 165 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 GKAP1Q5VSY0 366 aaPredicted RBP15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF584Q8IVC4 421 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 CDK20Q8IZL9 346 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 OR4K5Q8NGD3 323 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF442Q9H7R0 627 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 NDE1Q9NXR1 346 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 UGT2A1Q9Y4X1 527 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 V9GYQ6 96 aa15.99■□□□□ 0.15
SHKBP1-202ENST00000593764 TRBV4-1A0A0J9YWV2 114 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 TMEM129A0AVI4 362 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 B9A039 149 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 RNF223E7ERA6 249 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 PTP4A3O75365 173 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 BMP4P12644 408 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 NR4A1P22736 598 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 LIMS1P48059 325 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 MNAT1P51948 309 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 FMODQ06828 376 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 RAB39AQ14964 217 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 EFNB3Q15768 340 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 ZBED5Q49AG3 693 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 SLC25A47Q6Q0C1 308 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 RRM2BQ7LG56 351 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 CLDN22Q8N7P3 220 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF519Q8TB69 540 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 NSL1Q96IY1 281 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 TSPAN32Q96QS1 320 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 REG4Q9BYZ8 158 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 PLK3Q9H4B4 646 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 SMURF2Q9HAU4 748 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 PMF1-BGLAPU3KQ54 211 aa15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 FN1P02751 2386 aaKnown RBP15.98■□□□□ 0.15
SHKBP1-202ENST00000593764 FAM171A2A8MVW0 826 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 B2RBV5 119 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 ENTPD5O75356 428 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 FARS2O95363 451 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 RAB36O95755 333 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 SERPINA5P05154 406 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 HEXAP06865 529 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 T-ENOLP0DO92 83 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 CDAP32320 146 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 OMPP47874 163 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 ZNF84P51523 738 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 NUDT6P53370 316 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 MXRA7P84157 204 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 DAG1Q14118 895 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 MSMPQ1L6U9 139 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 FGD3Q5JSP0 725 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 KRT80Q6KB66 452 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 CCDC197Q8NCU1 140 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 MAPK1IP1LQ8NDC0 245 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 OR10H5Q8NGA6 315 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 OR52J3Q8NH60 311 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 NABP1Q96AH0 204 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 FAM46AQ96IP4 442 aaKnown RBP15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 NSMCE2Q96MF7 247 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 ALG12Q9BV10 488 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 TMEM5Q9Y2B1 443 aa15.97■□□□□ 0.15
SHKBP1-202ENST00000593764 IGHV4-30-2A0A087WSY4 118 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 LY6HO94772 140 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 MMP7P09237 267 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ITGA2P17301 1181 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 HOXB4P17483 251 aaPredicted RBP15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 NPR2P20594 1047 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 EFNA4P52798 201 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ERVK-25P63136 954 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 MRPS34P82930 218 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 CD47Q08722 323 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 SNTB2Q13425 540 aaKnown RBP15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 THEM4Q5T1C6 240 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 SLC16A14Q7RTX9 510 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ARIH2OSQ8N7S6 290 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 NSMAFQ92636 917 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 DOK1Q99704 481 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 GPA33Q99795 319 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 SIAEQ9HAT2 523 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ADAM21Q9UKJ8 722 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 FBXL3Q9UKT7 428 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 SIGLEC7Q9Y286 467 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ADAM18Q9Y3Q7 739 aa15.96■□□□□ 0.15
SHKBP1-202ENST00000593764 ABCA1O95477 2261 aa15.96■□□□□ 0.14
SHKBP1-202ENST00000593764 SH3PXD2BA1X283 911 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 GPRIN2O60269 458 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 MGRN1O60291 552 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 F12P00748 615 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 CD14P08571 375 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 IGFBP1P08833 259 aaPredicted RBP15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 FXYD6P3P58550 94 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 SNRPD2P62316 118 aaKnown RBP15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 KRTAP1-1Q07627 177 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 FAM205BPQ63HN1 556 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 RINLQ6ZS11 566 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 FAM122BQ7Z309 247 aa15.95■□□□□ 0.14
SHKBP1-202ENST00000593764 DPPA2Q7Z7J5 298 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms