RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 ZCCHC18P0CG32 403 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 NQO1P15559 274 aaKnown RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 TNFRSF1AP19438 455 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 GRPRP30550 384 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 S100A3P33764 101 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 SLC6A9P48067 706 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 CSNK1A1P48729 337 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 MMP15P51511 669 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 PIGFQ07326 219 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 CHI3L2Q15782 390 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 MS4A18Q3C1V0 323 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 KPRPQ5T749 579 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 OGFOD2Q6N063 350 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 ULK3Q6PHR2 472 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 LINC00114Q6XXX2 140 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 SPATC1Q76KD6 591 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 HDDC2Q7Z4H3 204 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 LRRC28Q86X40 367 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 CLEC4FQ8N1N0 589 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 KDM8Q8N371 416 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 PARP8Q8N3A8 854 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 ZNF283Q8N7M2 679 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 BHLHE22Q8NFJ8 381 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 OR52E2Q8NGJ4 325 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 KIF18AQ8NI77 898 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 CCL17Q92583 94 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 MAGEB18Q96M61 343 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 PANX1Q96RD7 426 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 RBM4BQ9BQ04 359 aaKnown RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 PDP1Q9P0J1 537 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 SEC14L4Q9UDX3 406 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 GIMAP2Q9UG22 337 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 ZDHHC2Q9UIJ5 367 aa7.34□□□□□ -1.23
SMAD4-215ENST00000592911 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.34□□□□□ -1.23
SMAD4-215ENST00000592911 ISPDA4D126 451 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 GMNCA6NCL1 334 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 CPSF4O95639 269 aaKnown RBP7.33□□□□□ -1.24
SMAD4-215ENST00000592911 CLPTM1O96005 669 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 IGHV1-46P01743 117 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 MYZAPP0CAP1 466 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 ETS2P15036 469 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TNFSF4P23510 183 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 AHCYP23526 432 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 ALDH3A1P30838 453 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 PRKAR1BP31321 381 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TAF9Q16594 264 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 C2orf68Q2NKX9 166 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 ESCO2Q56NI9 601 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 SPANXN4Q5MJ08 99 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 PHYHD1Q5SRE7 291 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 ATG16L1Q676U5 607 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 MSANTD1Q6ZTZ1 278 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 RHOUQ7L0Q8 258 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 PTOV1Q86YD1 416 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 SKA3Q8IX90 412 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 DYRK2Q92630 601 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TMEM54Q969K7 222 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TAAR8Q969N4 342 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 SLC47A1Q96FL8 570 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 SAMD8Q96LT4 415 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 CITED4Q96RK1 184 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TMEM43Q9BTV4 400 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 RAD21L1Q9H4I0 556 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TMEM38BQ9NVV0 291 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 GLTPQ9NZD2 209 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 SELENONQ9NZV5 590 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 STX18Q9P2W9 335 aaKnown RBP7.33□□□□□ -1.24
SMAD4-215ENST00000592911 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-215ENST00000592911 KLHL21Q9UJP4 597 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 FZR1Q9UM11 496 aa7.33□□□□□ -1.24
SMAD4-215ENST00000592911 TET2Q6N021 2002 aaPredicted RBP7.33□□□□□ -1.24
SMAD4-215ENST00000592911 KMT2CQ8NEZ4 4911 aaKnown RBP7.32□□□□□ -1.24
SMAD4-215ENST00000592911 TRAPPC2LH3BP13 241 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SURF4O15260 269 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SEC14L2O76054 403 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 IL6P05231 212 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 NR2C1P13056 603 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SELEP16581 610 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 LBPP18428 481 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 APLNRP35414 380 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 MDH2P40926 338 aaKnown RBP7.32□□□□□ -1.24
SMAD4-215ENST00000592911 ZNF133P52736 654 aaPredicted RBP7.32□□□□□ -1.24
SMAD4-215ENST00000592911 BTG1P62324 171 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 FADDQ13158 208 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 MAPK11Q15759 364 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 ALG10BQ5I7T1 473 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 ASPHD2Q6ICH7 369 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 Q6YL49 198 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SERPINA11Q86U17 422 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 VRK2Q86Y07 508 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 BBS10Q8TAM1 723 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SLC38A5Q8WUX1 472 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SSMEM1Q8WWF3 244 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMAD4-215ENST00000592911 ZNF566Q969W8 418 aa7.32□□□□□ -1.24
SMAD4-215ENST00000592911 DACT3Q96B18 629 aaPredicted RBP7.32□□□□□ -1.24
SMAD4-215ENST00000592911 SLC25A44Q96H78 314 aaPredicted RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms