RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 POLR2J2Q9GZM3 115 aaKnown RBP14.79□□□□□ -0.04
RETREG3-210ENST00000590541 POLR2J3Q9H1A7 115 aaKnown RBP14.79□□□□□ -0.04
RETREG3-210ENST00000590541 B3GAT2Q9NPZ5 323 aa14.79□□□□□ -0.04
RETREG3-210ENST00000590541 ZNF446Q9NWS9 450 aa14.79□□□□□ -0.04
RETREG3-210ENST00000590541 OPN4Q9UHM6 478 aa14.79□□□□□ -0.04
RETREG3-210ENST00000590541 BAG5Q9UL15 447 aa14.79□□□□□ -0.04
RETREG3-210ENST00000590541 AP3M1Q9Y2T2 418 aa14.79□□□□□ -0.04
RETREG3-210ENST00000590541 TRAF3IP2O43734 574 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-210ENST00000590541 CD247P20963 164 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 GSG1Q2KHT4 349 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 DCAF12L2Q5VW00 463 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 TTC33Q6PID6 262 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-210ENST00000590541 CALHM3Q86XJ0 350 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 C10orf53Q8N6V4 93 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 OR5J2Q8NH18 312 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 OR2M2Q96R28 347 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 WFDC6Q9BQY6 131 aa14.78□□□□□ -0.04
RETREG3-210ENST00000590541 UNKLQ9H9P5 680 aaKnown RBP14.78□□□□□ -0.04
RETREG3-210ENST00000590541 CMYA5Q8N3K9 4069 aa14.77□□□□□ -0.04
RETREG3-210ENST00000590541 CPSF4LA6NMK7 179 aaKnown RBP14.77□□□□□ -0.05
RETREG3-210ENST00000590541 FXYD1O00168 92 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 PLPP3O14495 311 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 CDC14BO60729 498 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 CD79AP11912 226 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 CBLP22681 906 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 PIGFQ07326 219 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 ALKBH6Q3KRA9 238 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.05
RETREG3-210ENST00000590541 TMEM123Q8N131 208 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 TAMM41Q96BW9 452 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 RAB39BQ96DA2 213 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF224Q9NZL3 707 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 DUSP13Q9UII6 198 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 CAPN7Q9Y6W3 813 aa14.77□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF726A6NNF4 738 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 M0R3G1 203 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 OR6A2O95222 327 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 IGHV2-5P01817 119 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 PRTN3P24158 256 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 FPR2P25090 351 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 ZFP36P26651 326 aaKnown RBP14.76□□□□□ -0.05
RETREG3-210ENST00000590541 RPS23P62266 143 aaKnown RBP14.76□□□□□ -0.05
RETREG3-210ENST00000590541 GUCY1A3Q02108 690 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 NPTX1Q15818 432 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 RABL3Q5HYI8 236 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 CGB2Q6NT52 195 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 ARPINQ7Z6K5 226 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 C20orf196Q8IYI0 205 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 SIGLECL1Q8N7X8 197 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 VANGL1Q8TAA9 524 aaPredicted RBP14.76□□□□□ -0.05
RETREG3-210ENST00000590541 MOGAT1Q96PD6 335 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 DUX5Q96PT3 197 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF426Q9BUY5 554 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 C7orf69Q9H7B7 122 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 NANSQ9NR45 359 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF346Q9UL40 294 aaKnown RBP14.76□□□□□ -0.05
RETREG3-210ENST00000590541 SLC7A7Q9UM01 511 aa14.76□□□□□ -0.05
RETREG3-210ENST00000590541 VWFP04275 2813 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 LOC100653049A0A140TA62 436 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 A0A1W2PPW3 197 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 ENTPD5O75356 428 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 KRT34O76011 436 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 HPRP00739 348 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 IGF2P01344 180 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 HIST1H2ABP04908 130 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 ADORA3P0DMS8 318 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 AHCYP23526 432 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 PTDSS1P48651 473 aaKnown RBP14.75□□□□□ -0.05
RETREG3-210ENST00000590541 CCL8P80075 99 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 NHLRC1Q6VVB1 395 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 HIST3H2AQ7L7L0 130 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF627Q7L945 461 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 RP9Q8TA86 221 aaKnown RBP14.75□□□□□ -0.05
RETREG3-210ENST00000590541 C10orf82Q8WW14 230 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 HIST1H2ACQ93077 130 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 C1orf147Q96MC9 270 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF583Q96ND8 569 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 DENND2DQ9H6A0 471 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF229Q9UJW7 825 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 WIPI2Q9Y4P8 454 aa14.75□□□□□ -0.05
RETREG3-210ENST00000590541 DNAJC9-AS1A6NH13 148 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 C17orf100A8MU93 164 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 FAM220BPB1ANY3 271 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 ATP8B1O43520 1251 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 CCDC22O60826 627 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 LYPD3O95274 346 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 CLPTM1O96005 669 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 THRBP10828 461 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 HLA-DOBP13765 273 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 GATA3P23771 443 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 MDH1P40925 334 aaKnown RBP14.74□□□□□ -0.05
RETREG3-210ENST00000590541 RBM34P42696 430 aaKnown RBP14.74□□□□□ -0.05
RETREG3-210ENST00000590541 CRYBB2P43320 205 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 GIPRP48546 466 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 CRYBA2P53672 197 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 GALK2Q01415 458 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF74Q16587 644 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 ZNF813Q6ZN06 617 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 DOK3Q7L591 496 aa14.74□□□□□ -0.05
RETREG3-210ENST00000590541 RBM45Q8IUH3 476 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms