RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FAM3DQ96BQ1 224 aa15.82■□□□□ 0.12
SCARF1-205ENST00000571272 TWSG1Q9GZX9 223 aa15.82■□□□□ 0.12
SCARF1-205ENST00000571272 OR10A5Q9H207 317 aa15.82■□□□□ 0.12
SCARF1-205ENST00000571272 SFXN1Q9H9B4 322 aa15.82■□□□□ 0.12
SCARF1-205ENST00000571272 SLC22A13Q9Y226 551 aa15.82■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM212A6NML5 194 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 TOR1AO14656 332 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 SNAPC5O75971 98 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 HLA-DQA2P01906 255 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ICAM2P13598 275 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ACHEP22303 614 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 FNTBP49356 437 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 DMWDQ09019 674 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 GPM6BQ13491 265 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 MANEAQ5SRI9 462 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 WBP2NLQ6ICG8 309 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ATG4DQ86TL0 474 aaPredicted RBP15.81■□□□□ 0.12
SCARF1-205ENST00000571272 PM20D2Q8IYS1 436 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 SLC19A3Q9BZV2 496 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 MYEF2Q9P2K5 600 aaKnown RBP15.81■□□□□ 0.12
SCARF1-205ENST00000571272 RWDD3Q9Y3V2 267 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 TDRD6O60522 2096 aaKnown RBP15.81■□□□□ 0.12
SCARF1-205ENST00000571272 SPTBN5Q9NRC6 3674 aaKnown RBP15.81■□□□□ 0.12
SCARF1-205ENST00000571272 CSF2RBP32927 897 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 GPR3P46089 330 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ARHGDIBP52566 201 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 UBXN2BQ14CS0 331 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 MED25Q71SY5 747 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 SLC37A2Q8TED4 501 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 MCHR2Q969V1 340 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 FAM131CQ96AQ9 280 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ZMAT3Q9HA38 289 aaKnown RBP15.81■□□□□ 0.12
SCARF1-205ENST00000571272 PRTFDC1Q9NRG1 225 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 SEC16AO15027 2179 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 D6RAR5 112 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 C5orf67F2Z3F1 127 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 M0QYG6 137 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 IFI6P09912 130 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 MST1P26927 711 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 CLEC1AQ8NC01 280 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 C4orf45Q96LM5 186 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 INTS14Q96SY0 518 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 LDAHQ9H6V9 325 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 ELOVL3Q9HB03 270 aa15.81■□□□□ 0.12
SCARF1-205ENST00000571272 C11orf98E9PRG8 122 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 KLF8O95600 359 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-205ENST00000571272 ASAH2BP0C7U1 165 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 RNH1P13489 461 aaKnown RBP15.8■□□□□ 0.12
SCARF1-205ENST00000571272 MEP1BQ16820 701 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 KLHL26Q53HC5 615 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 C17orf107Q6ZR85 190 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 ZNF627Q7L945 461 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 OOSP2Q86WS3 158 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 ELSPBP1Q96BH3 223 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 DCBLD2Q96PD2 775 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 MYO15AQ9UKN7 3530 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 HOXC4P09017 264 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-205ENST00000571272 MPGP29372 298 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 RAB11BQ15907 218 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 TMEM205Q6UW68 189 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 HSD17B13Q7Z5P4 300 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-205ENST00000571272 GAS2L1Q99501 681 aaPredicted RBP15.8■□□□□ 0.12
SCARF1-205ENST00000571272 SPEGQ15772 3267 aa15.8■□□□□ 0.12
SCARF1-205ENST00000571272 C17orf51A8MQB3 221 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 DOK2O60496 412 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 CDC40O60508 579 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 ZNF432O94892 652 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 WNT11O96014 354 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 HPP00738 406 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 PLGP00747 810 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 PNMTP11086 282 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 ZNF546Q86UE3 836 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 GABRG1Q8N1C3 465 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 OR6K3Q8NGY3 331 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 ZNF563Q8TA94 476 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 MRPS24Q96EL2 167 aaKnown RBP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 PBX4Q9BYU1 374 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 FBXO4Q9UKT5 387 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 TRAV14DV4A0A0A6YYC5 116 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 RENP00797 406 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 CA3P07451 260 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 GUSBP08236 651 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 OR4E1P0C645 316 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 LIPCP11150 499 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 APEHP13798 732 aaKnown RBP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 HNRNPA2B1P22626 353 aaKnown RBP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 RASGEF1BQ0VAM2 473 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 LRRC37A5PQ49AS3 106 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 BEX5Q5H9J7 111 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 Q6ZSR6 202 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 HERVK_113Q902F9 699 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 TAAR8Q969N4 342 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 TINAGL1Q9GZM7 467 aaPredicted RBP15.79■□□□□ 0.12
SCARF1-205ENST00000571272 CLDN16Q9Y5I7 305 aa15.79■□□□□ 0.12
SCARF1-205ENST00000571272 SRPX2O60687 465 aaPredicted RBP15.78■□□□□ 0.12
SCARF1-205ENST00000571272 PNPP00491 289 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 CSN2P05814 226 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 RPA2P15927 270 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 TPMTP51580 245 aa15.78■□□□□ 0.12
SCARF1-205ENST00000571272 EGR3Q06889 387 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms