RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZNF672Q499Z4 452 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 ZBED5Q49AG3 693 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 Q5PR19 223 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SMARCD3Q6STE5 483 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SLC22A25Q6T423 547 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 USP51Q70EK9 711 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 DEPDC4Q8N2C3 294 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 GPR137CQ8N3F9 429 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 C17orf78Q8N4C9 275 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 LRRC17Q8N6Y2 441 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 WDR31Q8NA23 367 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 OR13C2Q8NGS9 318 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 LILRB1Q8NHL6 650 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 CYGBQ8WWM9 190 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 RADILQ96JH8 1075 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 HRASLS5Q96KN8 279 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 TNFRSF13CQ96RJ3 184 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 ANKRD60Q9BZ19 345 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 Q9H521 79 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 EGLN3Q9H6Z9 239 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 SLC17A5Q9NRA2 495 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 NDRG4Q9ULP0 352 aaKnown RBP12.68□□□□□ -0.38
COMMD4-225ENST00000569245 HIF3AQ9Y2N7 669 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
COMMD4-225ENST00000569245 ROS1P08922 2347 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 SERPINI2O75830 405 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 WNT11O96014 354 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 HIST1H2ABP04908 130 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-225ENST00000569245 ACADSP16219 412 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 PTAFRP25105 342 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 CD40P25942 277 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 GIPRP48546 466 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 CDH11P55287 796 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 CDK5Q00535 292 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 ROR2Q01974 943 aaKnown RBP12.67□□□□□ -0.38
COMMD4-225ENST00000569245 TAF11Q15544 211 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 HIKESHIQ53FT3 197 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 HIST3H2AQ7L7L0 130 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 OR51A7Q8NH64 312 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 TEX47Q8TBZ9 253 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 FANK1Q8TC84 345 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 HIST1H2ACQ93077 130 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 PLA2G12AQ9BZM1 189 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 MRPL39Q9NYK5 338 aaKnown RBP12.67□□□□□ -0.38
COMMD4-225ENST00000569245 CISD1Q9NZ45 108 aaKnown RBP12.67□□□□□ -0.38
COMMD4-225ENST00000569245 B3GAT1Q9P2W7 334 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 RCE1Q9Y256 329 aa12.67□□□□□ -0.38
COMMD4-225ENST00000569245 A0A096LPE4 126 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 LOC102725191A0A1B0GVB3 256 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 A0A1W2PPZ6 126 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF726A6NNF4 738 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 MS4A18H0YCH9 400 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 NDUFB2O95178 105 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 POU1F1P28069 291 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 PTH2RP49190 550 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 UBE2NP61088 152 aaKnown RBP12.66□□□□□ -0.38
COMMD4-225ENST00000569245 POU3F1Q03052 451 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-225ENST00000569245 PUDPQ08623 228 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 MS4A18Q3C1V0 323 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 SLX4IPQ5VYV7 408 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 CARD17Q5XLA6 110 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 SLC27A4Q6P1M0 643 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 NANOGNBQ7Z5D8 188 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 ADPRHL1Q8NDY3 354 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 OR52L1Q8NGH7 329 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 OR8D4Q8NGM9 314 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 OR1K1Q8NGR3 316 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 SAMD8Q96LT4 415 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF570Q96NI8 536 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 GPX7Q96SL4 187 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-225ENST00000569245 LINC00470Q9BZP3 86 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 GMPPBQ9Y5P6 360 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 NOX1Q9Y5S8 564 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 VPS13CQ709C8 3753 aa12.66□□□□□ -0.38
COMMD4-225ENST00000569245 PRR14LQ5THK1 2151 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 SHISA9B4DS77 424 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 C11orf98E9PRG8 122 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 M0R3G1 203 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 PLPP3O14495 311 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 TMCC2O75069 709 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ZNF432O94892 652 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 SOD3P08294 240 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ADORA3P0DMS8 318 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 MYF6P23409 242 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 SLC6A6P31641 620 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 GGT2P36268 569 aa12.65□□□□□ -0.38
COMMD4-225ENST00000569245 ATP5J2P56134 94 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms