RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 AKAP7Q9P0M2 348 aaPredicted RBP16.27■□□□□ 0.2
SMPD3-211ENST00000568373 A0A1W2PNV4 684 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 FAM47E-STBD1D6RA91 191 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 FOLR3P41439 243 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 MAP2K3P46734 347 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 RASGEF1BQ0VAM2 473 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 SELENBP1Q13228 472 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 SLC17A1Q14916 467 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 PRAMEF20Q5VT98 475 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 OPN5Q6U736 354 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 LRRN1Q6UXK5 716 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF679Q8IYX0 411 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 UBE2J2Q8N2K1 259 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 PRSS35Q8N3Z0 413 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 OR11G2Q8NGC1 345 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 OR4K17Q8NGC6 315 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 KCNK17Q96T54 332 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 GFI1Q99684 422 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 WACQ9BTA9 647 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 COMMD4Q9H0A8 199 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ELOVL3Q9HB03 270 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 SPATA2Q9UM82 520 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 COA3Q9Y2R0 106 aaPredicted RBP16.26■□□□□ 0.19
SMPD3-211ENST00000568373 A0A1B0GVC2 190 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 A6NIN4 97 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF432O94892 652 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 PRKAR1AP10644 381 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 TCEA1P23193 301 aaKnown RBP16.26■□□□□ 0.19
SMPD3-211ENST00000568373 KIR2DL3P43628 341 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 INPP1P49441 399 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ROM1Q03395 351 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 PYHIN1Q6K0P9 492 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 MZT2BQ6NZ67 158 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 FDX2Q6P4F2 183 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 DNM1P34Q6PK57 102 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF676Q8N7Q3 588 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 DTX3Q8N9I9 347 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 ENKURQ8TC29 256 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 C4orf45Q96LM5 186 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 DCBLD2Q96PD2 775 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 PTGES2Q9H7Z7 377 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 RBFOX1Q9NWB1 397 aaKnown RBP16.26■□□□□ 0.19
SMPD3-211ENST00000568373 EML6Q6ZMW3 1958 aa16.26■□□□□ 0.19
SMPD3-211ENST00000568373 AIPO00170 330 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 TFECO14948 347 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF254O75437 659 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 C19orf57Q0VDD7 668 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 SF3A2Q15428 464 aaKnown RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 TMEM81Q6P7N7 255 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 WDFY1Q8IWB7 410 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF454Q8N9F8 522 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF671Q8TAW3 534 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ZC3HAV1LQ96H79 300 aaKnown RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 MED29Q9NX70 200 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ANKRD10Q9NXR5 420 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 GPR179Q6PRD1 2367 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 NSG1A0A0A6YYJ2 146 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 IFITM5A6NNB3 132 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 LYRM1O43325 122 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 TMEM127O75204 238 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 PTGS2P35354 604 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 EIF1P41567 113 aaKnown RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 FOXK1P85037 733 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 FMODQ06828 376 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 KCTD18Q6PI47 426 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 NDUFAF7Q7L592 441 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF433Q8N7K0 673 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 SLC26A10Q8NG04 563 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 OR5M1Q8NGP8 315 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 LGALS14Q8TCE9 139 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 ABHD1Q96SE0 405 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 HDHD2Q9H0R4 259 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 SLITRK2Q9H156 845 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 TMEM185BQ9H7F4 350 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 TCF7L1Q9HCS4 588 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 B3GAT1Q9P2W7 334 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 CLEC4AQ9UMR7 237 aa16.25■□□□□ 0.19
SMPD3-211ENST00000568373 RPH3AQ9Y2J0 694 aaPredicted RBP16.25■□□□□ 0.19
SMPD3-211ENST00000568373 A0A1W2PQ72 361 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 LNP1A1A4G5 178 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 SLC43A1O75387 559 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 STK17BO94768 372 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 MPZL1O95297 269 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 ADH6P28332 368 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 KIR3DL2P43630 455 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 SOX2P48431 317 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 EIF2B1Q14232 305 aaKnown RBP16.24■□□□□ 0.19
SMPD3-211ENST00000568373 WDR38Q5JTN6 314 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 TEX30Q5JUR7 227 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 ZNF544Q6NX49 715 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 STAC2Q6ZMT1 411 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 ADPRHL1Q8NDY3 354 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 GPR148Q8TDV2 347 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 RNF128Q8TEB7 428 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 TRIM63Q969Q1 353 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 RFT1Q96AA3 541 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 CMTM3Q96MX0 182 aa16.24■□□□□ 0.19
SMPD3-211ENST00000568373 THAP7Q9BT49 309 aaPredicted RBP16.24■□□□□ 0.19
SMPD3-211ENST00000568373 ABHD6Q9BV23 337 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms