RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 F6UB75 175 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 H0YHG0 523 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 DLGAP1O14490 977 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 RTL8CO15255 209 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 RSPH10BP0C881 870 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 ZNF823P16415 610 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 AK4P27144 223 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 UBE2AP49459 152 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 CCNHP51946 323 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 PTGES3Q15185 160 aaKnown RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 DEFB116Q30KQ4 102 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 DUX4L9Q6RFH8 374 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 ZNF493Q6ZR52 646 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 SAXO1Q8IYX7 474 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 EID2Q8N6I1 236 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 SPATA4Q8NEY3 305 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 OR10R2Q8NGX6 335 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 GPR151Q8TDV0 419 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 STARD8Q92502 1023 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 N4BP2L2Q92802 583 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 P2RX4Q99571 388 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 NEUROG2Q9H2A3 272 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 IFI27L2Q9H2X8 130 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 VCXQ9H320 206 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 PATZ1Q9HBE1 687 aaKnown RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 FGF20Q9NP95 211 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 CD84Q9UIB8 345 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 MN1Q10571 1320 aaPredicted RBP3.38□□□□□ -1.87
LINC00557-201ENST00000563184 CARMIL3Q8ND23 1372 aa3.38□□□□□ -1.87
LINC00557-201ENST00000563184 GOLGA8OA6NCC3 632 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 GOLGA8NF8WBI6 632 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 KMOO15229 486 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 MRPS12O15235 138 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 ANGPTL7O43827 346 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 CLPXO76031 633 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 GNAO1P09471 354 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 AQP2P41181 271 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 RPS9P46781 194 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 NUTF2P61970 127 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 YWHAGP61981 247 aaKnown RBP eCLIP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 ACTA1P68133 377 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 KCTD19Q17RG1 926 aaPredicted RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 VPS26BQ4G0F5 336 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 TMEM179Q6ZVK1 233 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 MMAAQ8IVH4 418 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 PDIK1LQ8N165 341 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 FAM86B1Q8N7N1 296 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 FBXL13Q8NEE6 735 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 RHEBL1Q8TAI7 183 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 RAB3IL1Q8TBN0 382 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 PIK3IP1Q96FE7 263 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 CNDP1Q96KN2 507 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 CHAC1Q9BUX1 264 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 RACGAP1Q9H0H5 632 aa3.37□□□□□ -1.87
LINC00557-201ENST00000563184 RRP15Q9Y3B9 282 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 MRPS18BQ9Y676 258 aaKnown RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 CENPJQ9HC77 1338 aaPredicted RBP3.37□□□□□ -1.87
LINC00557-201ENST00000563184 NOTCH2Q04721 2471 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 PCM1Q15154 2024 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 HEATR9A2RTY3 570 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 FAM47DPA6NHR8 397 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 DYNC1I1O14576 645 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 EEDO75530 441 aaKnown RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 AIFM1O95831 613 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 TNNI1P19237 187 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 LONP1P36776 959 aaKnown RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 SSR4P51571 173 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ACTA2P62736 377 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ACTG2P63267 376 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ACTC1P68032 377 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 LRRC74AQ0VAA2 488 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 CCDC183Q5T5S1 534 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 KHDRBS2Q5VWX1 349 aaKnown RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 NCCRP1Q6ZVX7 275 aaPredicted RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 C15orf56Q8N910 161 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 KIFAP3Q92845 792 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 RASD2Q96D21 266 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 DUS3LQ96G46 650 aaKnown RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 BMFQ96LC9 184 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ATP5SQ99766 215 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 NUP58Q9BVL2 599 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ILKAPQ9H0C8 392 aaPredicted RBP3.36□□□□□ -1.87
LINC00557-201ENST00000563184 LINC00597Q9H2U6 94 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 NOX3Q9HBY0 568 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 ING4Q9UNL4 249 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 RABL2BQ9UNT1 228 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 PSG8Q9UQ74 426 aa3.36□□□□□ -1.87
LINC00557-201ENST00000563184 IGHV3-66A0A0C4DH42 116 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 AP3B1O00203 1094 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 CLIC3O95833 236 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 RETP07949 1114 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 ACLYP53396 1101 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 PRMT2P55345 433 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 POU2AF1Q16633 256 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 FAM83EQ2M2I3 478 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 XKR7Q5GH72 579 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 ANKRD26P1Q6NSI1 321 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 Q6ZR03 302 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 CCDC73Q6ZRK6 1079 aa3.35□□□□□ -1.87
LINC00557-201ENST00000563184 OR10G2Q8NGC3 310 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms