RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 GPRIN2O60269 458 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 PMS2P2O95744 297 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 MELTFP08582 738 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 CT62P0C5K7 136 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ST6GAL1P15907 406 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 PYCR1P32322 319 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 RAB38P57729 211 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 OR12D2P58182 307 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 NKAPLQ5M9Q1 402 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 RAB12Q6IQ22 244 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ARMC6Q6NXE6 501 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 IL34Q6ZMJ4 242 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 RANBP3LQ86VV4 465 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 GLB1L2Q8IW92 636 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ZFP82Q8N141 532 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 COX18Q8N8Q8 333 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 OR5J2Q8NH18 312 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 GCDHQ92947 438 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 CTHRC1Q96CG8 243 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ADGRL4Q9HBW9 690 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 FBXO34Q9NWN3 711 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 UPB1Q9UBR1 384 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 KCNE5Q9UJ90 142 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 DMRT1Q9Y5R6 373 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 NDUFS6O75380 124 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC25A12O75746 678 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 RLN1P04808 185 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 CTSBP07858 339 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 NID1P14543 1247 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 CSF2RBP32927 897 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 PGDP52209 483 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 SCAND1P57086 179 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 STARD6P59095 220 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 TAS2R20P59543 309 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 GAS6Q14393 721 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 EIF2S3LQ2VIR3 472 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 RPL22L1Q6P5R6 122 aaKnown RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 MAMSTRQ6ZN01 415 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ACOT7LQ6ZUV0 252 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 BEST3Q8N1M1 668 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 LNX2Q8N448 690 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ARHGEF39Q8N4T4 335 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC25A28Q96A46 364 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 MIB2Q96AX9 1013 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 KLHDC7BQ96G42 594 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 DERL3Q96Q80 235 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 TEAD3Q99594 435 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 PRSS27Q9BQR3 290 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 UCK1Q9HA47 277 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 CMC2Q9NRP2 79 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 IL20RAQ9UHF4 553 aa12.69□□□□□ -0.38
RABGGTA-220ENST00000560998 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 A0A1W2PPC4 97 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 GXYLT2A0PJZ3 443 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 UNC119BA6NIH7 251 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 B4DGG1 531 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 H7C417 338 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 PEX12O00623 359 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 BHLHE40O14503 412 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 CTNSO60931 367 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 RBBP9O75884 186 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 AKR7A3O95154 331 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 AK1P00568 194 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 NPBWR1P48145 328 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 VWA2Q5GFL6 755 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 MRPL2Q5T653 305 aaKnown RBP12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 PWWP2BQ6NUJ5 590 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 FAAP20Q6NZ36 180 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 RPTNQ6XPR3 784 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 FCRLAQ7L513 359 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 PARGQ86W56 976 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 STX12Q86Y82 276 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 OR9A4Q8NGU2 314 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 SYNPRQ8TBG9 265 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 EDARADDQ8WWZ3 215 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 SMPDL3BQ92485 455 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 VRK1Q99986 396 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 LRRC61Q9BV99 259 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 OR52D1Q9H346 318 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 MYOZ1Q9NP98 299 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 MMP26Q9NRE1 261 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 SMCO4Q9NRQ5 59 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 C2orf42Q9NWW7 574 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 MTFP1Q9UDX5 166 aa12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 TP53BP1Q12888 1972 aaPredicted RBP12.68□□□□□ -0.38
RABGGTA-220ENST00000560998 COLCA2A8K830 154 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 CDC42EP2O14613 210 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 LYPD3O95274 346 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 SRMP19623 302 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 GABRA3P34903 492 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 BLKP51451 505 aa12.67□□□□□ -0.38
RABGGTA-220ENST00000560998 RPS11P62280 158 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms