RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 ZNF488Q96MN9 340 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 PKMYT1Q99640 499 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 SH3GL3Q99963 347 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 C1orf198Q9H425 327 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 ADAP2Q9NPF8 381 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 ENOPH1Q9UHY7 261 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 LAMP5Q9UJQ1 280 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 CHMP2BQ9UQN3 213 aa0.54□□□□□ -2.32
FOXN3-216ENST00000557496 MRPS18BQ9Y676 258 aaKnown RBP0.54□□□□□ -2.32
FOXN3-216ENST00000557496 TRAV39A0A0B4J263 110 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 A0A0B4J2A0 478 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 IGHV1OR15-9A0A0B4J2B8 117 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 FAM170AA1A519 330 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 OR5B21A6NL26 309 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 BTNL10A8MVZ5 291 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 C3orf84H3BNL1 204 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 ATP5LO75964 103 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 TM7SF2O76062 418 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 KLHL2O95198 593 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 CAPN1P07384 714 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 CT62P0C5K7 136 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 DRD5P21918 477 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 DTYMKP23919 212 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 HTR2AP28223 471 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 HRH1P35367 487 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 RFX3P48380 749 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 ZNF138P52744 262 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 GANABQ14697 944 aaKnown RBP0.53□□□□□ -2.32
FOXN3-216ENST00000557496 SNRNP35Q16560 246 aaKnown RBP0.53□□□□□ -2.32
FOXN3-216ENST00000557496 DEFB134Q4QY38 66 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 ARL9Q6T311 187 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 RBM43Q6ZSC3 357 aaKnown RBP0.53□□□□□ -2.32
FOXN3-216ENST00000557496 ASCL5Q7RTU5 278 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 SLC16A13Q7RTY0 426 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 PRSS58Q8IYP2 241 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 FAM133AQ8N9E0 248 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 MED8Q96G25 268 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 IP6K3Q96PC2 410 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 SECISBP2Q96T21 854 aaKnown RBP0.53□□□□□ -2.32
FOXN3-216ENST00000557496 OR52D1Q9H346 318 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 UVRAGQ9P2Y5 699 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 PCSK1NQ9UHG2 260 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 SHPKQ9UHJ6 478 aa0.53□□□□□ -2.32
FOXN3-216ENST00000557496 HOOK1Q9UJC3 728 aaKnown RBP0.53□□□□□ -2.32
FOXN3-216ENST00000557496 TRAV6A0A075B6T7 132 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 MGRN1O60291 552 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 UTS2O95399 124 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 RAB3DO95716 219 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 PTBP3O95758 552 aaKnown RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 IGLV2-8P01709 118 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 RDXP35241 583 aaKnown RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 CEACAM6P40199 344 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 OGDHQ02218 1023 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 STUMQ69YW2 141 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 ADNP2Q6IQ32 1131 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 MORN3Q6PF18 240 aaPredicted RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 LHFPL3Q86UP9 236 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 CDKL3Q8IVW4 592 aaPredicted RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 WDFY1Q8IWB7 410 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF557Q8N988 423 aaPredicted RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 FBXL13Q8NEE6 735 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 OR10T2Q8NGX3 314 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 OR6N1Q8NGY5 312 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 PYROXD1Q8WU10 500 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 C4orf36Q96KX1 117 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 C18orf15Q96N68 181 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 ZNF649Q9BS31 505 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 FN3KRPQ9HA64 309 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 KCNIP3Q9Y2W7 256 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 TSSC4Q9Y5U2 329 aaPredicted RBP0.52□□□□□ -2.33
FOXN3-216ENST00000557496 NACADO15069 1562 aa0.52□□□□□ -2.33
FOXN3-216ENST00000557496 PLXNB1O43157 2135 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 CASP14P31944 242 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 IRX3P78415 501 aaPredicted RBP0.51□□□□□ -2.33
FOXN3-216ENST00000557496 AP1B1Q10567 949 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 TCP10Q12799 353 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 KLRB1Q12918 225 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 FAM222AQ5U5X8 452 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 PYHIN1Q6K0P9 492 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 TRIM40Q6P9F5 258 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 TEX43Q6ZNM6 134 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 USP50Q70EL3 339 aaPredicted RBP0.51□□□□□ -2.33
FOXN3-216ENST00000557496 CCDC50Q8IVM0 306 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 SLC38A6Q8IZM9 456 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 CEP112Q8N8E3 955 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 MRPL43Q8N983 215 aaKnown RBP0.51□□□□□ -2.33
FOXN3-216ENST00000557496 OR4D5Q8NGN0 318 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 UBE2E3Q969T4 207 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 WDR34Q96EX3 536 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 ZBED3Q96IU2 234 aaPredicted RBP0.51□□□□□ -2.33
FOXN3-216ENST00000557496 CLCC1Q96S66 551 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 RHOXF2Q9BQY4 288 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 RPAP1Q9BWH6 1393 aaPredicted RBP0.51□□□□□ -2.33
FOXN3-216ENST00000557496 FAIM2Q9BWQ8 316 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 MEMO1Q9Y316 297 aa0.51□□□□□ -2.33
FOXN3-216ENST00000557496 ANKRD12Q6UB98 2062 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
FOXN3-216ENST00000557496 C4orf51C9J302 202 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 F8WDY8 70 aa0.5□□□□□ -2.33
FOXN3-216ENST00000557496 DIRAS1O95057 198 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms