RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 SYT4Q9H2B2 425 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 NPDC1Q9NQX5 325 aaPredicted RBP9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 C8orf4Q9NR00 106 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM118AQ9NWS6 357 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 SMPD3Q9NY59 655 aaPredicted RBP9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF226Q9NYT6 803 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 GRHPRQ9UBQ7 328 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 RAB26Q9ULW5 256 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 LRBAP50851 2863 aa9.39□□□□□ -0.91
NPIPB3-210ENST00000542817 IGLV1-36A0A0B4J1U3 117 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF726A6NNF4 738 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 C19orf84I3L1E1 186 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 M0R3G1 203 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC43A1O75387 559 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 CNOT4O95628 575 aaKnown RBP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 IGHG1P01857 330 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 QDPRP09417 244 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 CLUP10909 449 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 HSPA13P48723 471 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 CSNK1A1P48729 337 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ITGADQ13349 1161 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 CRMP1Q14194 572 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 TSC22D1Q15714 1073 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC25A35Q3KQZ1 300 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 LINC01590Q5TEZ4 76 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM205BPQ63HN1 556 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 MTFR2Q6P444 385 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 UGT2A3Q6UWM9 527 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 STAC2Q6ZMT1 411 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 USP51Q70EK9 711 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF627Q7L945 461 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 BCDIN3DQ7Z5W3 292 aaKnown RBP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZBTB46Q86UZ6 589 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF100Q8IYN0 542 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF433Q8N7K0 673 aaPredicted RBP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 POMGNT2Q8NAT1 580 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ACBD4Q8NC06 268 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 BBS1Q8NFJ9 593 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 OR52E2Q8NGJ4 325 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ASB5Q8WWX0 329 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 HTRA1Q92743 480 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 TFAP2CQ92754 450 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF566Q969W8 418 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 BOD1Q96IK1 185 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 MRPS26Q9BYN8 205 aaKnown RBP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 FN3KQ9H479 309 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF696Q9H7X3 374 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 MED20Q9H944 212 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 CRLF2Q9HC73 371 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 HINT3Q9NQE9 182 aaKnown RBP9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF224Q9NZL3 707 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 BAIAP2Q9UQB8 552 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 GPR52Q9Y2T5 361 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 ICE1Q9Y2F5 2266 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
NPIPB3-210ENST00000542817 LOC100130705A0A1B0GUX0 176 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 ZNF503-AS2A6NEH8 195 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 A6NIZ1 184 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM183AA6NL82 134 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 FAM90A27PA6NNH2 459 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 CLIC3O95833 236 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 GPANK1O95872 356 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 GNAO1P09471 354 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 PSKH1P11801 424 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 IGFBP2P18065 325 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 SLC2A5P22732 501 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 GGT2P36268 569 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 PCYT1AP49585 367 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 SMSP52788 366 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 RAD23AP54725 363 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 RAP1BP61224 184 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 RAP1AP62834 184 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 FAPQ12884 760 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 AADACL4Q5VUY2 407 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 LAIR2Q6ISS4 152 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 LEG1Q6P5S2 330 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 XKRXQ6PP77 449 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 SEZ6L2Q6UXD5 910 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 ADCK1Q86TW2 530 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 CXorf67Q86X51 503 aaPredicted RBP9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 NABP1Q96AH0 204 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 NUAK2Q9H093 628 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 ASB6Q9NWX5 421 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 TVP23BQ9NYZ1 205 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 AASSQ9UDR5 926 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 RTTNQ86VV8 2226 aa9.37□□□□□ -0.91
NPIPB3-210ENST00000542817 OR6C65A6NJZ3 312 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 EEF1E1-BLOC1S5C9J1V9 151 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 DHHO43323 396 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 AKAP8O43823 692 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 MPZL1O95297 269 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 CLDN14O95500 239 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 HMGN1P05114 100 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 GYPBP06028 91 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 GAAP10253 952 aa9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 PSMB1P20618 241 aaKnown RBP9.36□□□□□ -0.91
NPIPB3-210ENST00000542817 MPGP29372 298 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms