RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 PARP8Q8N3A8 854 aa17■□□□□ 0.31
DDX55-207ENST00000540763 LNX2Q8N448 690 aa17■□□□□ 0.31
DDX55-207ENST00000540763 FAM169BQ8N8A8 192 aa17■□□□□ 0.31
DDX55-207ENST00000540763 ATG16L2Q8NAA4 619 aa17■□□□□ 0.31
DDX55-207ENST00000540763 OR8D4Q8NGM9 314 aa17■□□□□ 0.31
DDX55-207ENST00000540763 OR52N5Q8NH56 324 aa17■□□□□ 0.31
DDX55-207ENST00000540763 RASD2Q96D21 266 aa17■□□□□ 0.31
DDX55-207ENST00000540763 PLA2G12AQ9BZM1 189 aa17■□□□□ 0.31
DDX55-207ENST00000540763 S100A14Q9HCY8 104 aa17■□□□□ 0.31
DDX55-207ENST00000540763 KIF17Q9P2E2 1029 aa17■□□□□ 0.31
DDX55-207ENST00000540763 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.99■□□□□ 0.31
DDX55-207ENST00000540763 SOCS2O14508 198 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 SIAH2O43255 324 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 OSMP13725 252 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 NPR2P20594 1047 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 PRKACGP22612 351 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 NOS3P29474 1203 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 MRPS34P82930 218 aaKnown RBP16.99■□□□□ 0.31
DDX55-207ENST00000540763 MYBPC1Q00872 1141 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 FOXL2NBQ6ZUU3 175 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 DPPA2Q7Z7J5 298 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 OR2T33Q8NG76 320 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 TEX47Q8TBZ9 253 aa16.99■□□□□ 0.31
DDX55-207ENST00000540763 NANOS1Q8WY41 292 aaKnown RBP16.99■□□□□ 0.31
DDX55-207ENST00000540763 ESRP2Q9H6T0 727 aaKnown RBP16.99■□□□□ 0.31
DDX55-207ENST00000540763 CRNNQ9UBG3 495 aaPredicted RBP16.99■□□□□ 0.31
DDX55-207ENST00000540763 FARS2O95363 451 aaKnown RBP16.98■□□□□ 0.31
DDX55-207ENST00000540763 SOX14O95416 240 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 SLC2A10O95528 541 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 OR8G3PP0DMU2 310 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 PRF1P14222 555 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 B4GALT1P15291 398 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 LOXP28300 417 aaPredicted RBP16.98■□□□□ 0.31
DDX55-207ENST00000540763 FMODQ06828 376 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 SLC36A3Q495N2 470 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 NCMAPQ5T1S8 102 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 JAZF1Q86VZ6 243 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 SLC22A24Q8N4F4 322 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 STMN2Q93045 179 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 TSSK6Q9BXA6 273 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 NPAP1Q9NZP6 1156 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 ENOPH1Q9UHY7 261 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 UGT2A1Q9Y4X1 527 aa16.98■□□□□ 0.31
DDX55-207ENST00000540763 RAI1Q7Z5J4 1906 aaPredicted RBP16.98■□□□□ 0.31
DDX55-207ENST00000540763 APCP25054 2843 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 CSMD1Q96PZ7 3565 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 A0A096LPE4 126 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 IGKV1D-43A0A0B4J1Z2 117 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 A0A1W2PPZ6 126 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 H3BN98 237 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 RENP00797 406 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 HIST1H1CP16403 213 aaKnown RBP16.97■□□□□ 0.31
DDX55-207ENST00000540763 PTAFRP25105 342 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 CRABP1P29762 137 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 CDKN2AP42771 156 aaKnown RBP16.97■□□□□ 0.31
DDX55-207ENST00000540763 CLEC12AQ5QGZ9 265 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 DNM1P34Q6PK57 102 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 TMEM108Q6UXF1 575 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 PTCHD4Q6ZW05 846 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 PIK3IP1Q96FE7 263 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 PKP2Q99959 881 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 TMEM204Q9BSN7 226 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 SYT4Q9H2B2 425 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 CLEC4MQ9H2X3 399 aaPredicted RBP16.97■□□□□ 0.31
DDX55-207ENST00000540763 PAPOLBQ9NRJ5 636 aaKnown RBP16.97■□□□□ 0.31
DDX55-207ENST00000540763 KLHL21Q9UJP4 597 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 FBXL3Q9UKT7 428 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 OAZ3Q9UMX2 235 aa16.97■□□□□ 0.31
DDX55-207ENST00000540763 H7C1C5 153 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 SEC14L2O76054 403 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 UBL3O95164 117 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 IGKV3-15P01624 115 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 GRK5P34947 590 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 DAPP51397 102 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 LCN6P62502 163 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 PGGHGQ32M88 737 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 FBXW10Q5XX13 1052 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 KDM4DQ6B0I6 523 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 SLC27A4Q6P1M0 643 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 TMEM200AQ86VY9 491 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 NABP1Q96AH0 204 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 PLPPR2Q96GM1 343 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 WACQ9BTA9 647 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 SEMA6AQ9H2E6 1030 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 SIAEQ9HAT2 523 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 B3GNT2Q9NY97 397 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 ZNF224Q9NZL3 707 aa16.96■□□□□ 0.31
DDX55-207ENST00000540763 HEATR1Q9H583 2144 aaKnown RBP16.96■□□□□ 0.3
DDX55-207ENST00000540763 A0A1W2PR80 420 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 KHDRBS3O75525 346 aaKnown RBP16.95■□□□□ 0.3
DDX55-207ENST00000540763 IGLV1-44P01699 117 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 CBR1P16152 277 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 ARR3P36575 388 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 GUCA1AP43080 201 aaPredicted RBP16.95■□□□□ 0.3
DDX55-207ENST00000540763 ESRRGP62508 458 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.95■□□□□ 0.3
DDX55-207ENST00000540763 GSG1Q2KHT4 349 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 FAM27BQ5VT28 67 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 LEG1Q6P5S2 330 aa16.95■□□□□ 0.3
DDX55-207ENST00000540763 PQLC1Q8N2U9 271 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms