RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 PHB2Q99623 299 aa11.69□□□□□ -0.54
SFSWAP-209ENST00000540469 TRIM2Q9C040 744 aa11.69□□□□□ -0.54
SFSWAP-209ENST00000540469 FRRS1LQ9P0K9 344 aa11.69□□□□□ -0.54
SFSWAP-209ENST00000540469 CXorf51AA0A1B0GTR3 108 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 A0A1W2PQ45 241 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 A0A1W2PQY0 241 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ALOX12BO75342 701 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SLC35G6P0C7Q6 338 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CCR4P51679 360 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SNRPNP63162 240 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ZIC1Q15915 447 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 RNASE10Q5GAN6 216 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 BAP18Q8IXM2 172 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CHST4Q8NCG5 386 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 OR52E1Q8NGJ3 308 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 A0A0B4J2E0 115 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 A0A1B0GX12 115 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 OR2T1O43869 369 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 PQBP1O60828 265 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 GLCEO94923 617 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ITGB2P05107 769 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SDHAP31040 664 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CD96P40200 585 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SGCAQ16586 387 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 OTPQ5XKR4 325 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ZNF585AQ6P3V2 769 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CDRT4Q8N9R6 151 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 OR2L3Q8NG85 312 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 RELTQ969Z4 430 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CMKLR1Q99788 373 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 RPS10P5Q9NQ39 176 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 DZANK1Q9NVP4 752 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 NOSIPQ9Y314 301 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CSAG2Q9Y5P2 127 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 DENND4CQ5VZ89 1909 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CD1AP06126 327 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CPMP14384 443 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ABOP16442 354 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 PNLIPRP2P54317 469 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CDK3Q00526 305 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 EIF2B1Q14232 305 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 GFOD2Q3B7J2 385 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 KLHL26Q53HC5 615 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ZNF765Q7L2R6 523 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 JAGN1Q8N5M9 183 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 OR4S1Q8NGB4 309 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 PHOSPHO1Q8TCT1 267 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 ELP5Q8TE02 316 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SLC6A7Q99884 636 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 CHMP1AQ9HD42 196 aaPredicted RBP11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 SERTAD3Q9UJW9 196 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
SFSWAP-209ENST00000540469 NUP210Q8TEM1 1887 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 FITM1A5D6W6 292 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 C4orf47A7E2U8 309 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 YKT6O15498 198 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 TMEM127O75204 238 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 CPT2P23786 658 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 PTAFRP25105 342 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 GRK6P43250 576 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 FABP9Q0Z7S8 132 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 DPY19L4Q7Z388 723 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 NPEPL1Q8NDH3 523 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 ALX4Q9H161 411 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 MSRAQ9UJ68 235 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 ENTPD2Q9Y5L3 495 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 COL4A3Q01955 1670 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 UNC80Q8N2C7 3258 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 LOC100289279A0A1B0GTE1 492 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 MEX3AA1L020 520 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 IGLON5A6NGN9 336 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 SULT2B1O00204 365 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 B3GALT2O43825 422 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 ICOSLGO75144 302 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 LYPD3O95274 346 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 CD8AP01732 235 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 IFNA6P05013 189 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 GGTLC2Q14390 218 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 NR0B2Q15466 257 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 NNATQ16517 81 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 VWA2Q5GFL6 755 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 SLC35D3Q5M8T2 416 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 SLC39A5Q6ZMH5 540 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 ZAR1Q86SH2 424 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 SKA3Q8IX90 412 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 OR5AP2Q8NGF4 316 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 DNAJA3Q96EY1 480 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 SMCO4Q9NRQ5 59 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 CKLFQ9UBR5 152 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 MRM2Q9UI43 246 aaKnown RBP11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 ICAM5Q9UMF0 924 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 KLHDC2Q9Y2U9 406 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 MYO9BQ13459 2157 aa11.67□□□□□ -0.54
SFSWAP-209ENST00000540469 TRBV23OR9-2A0A075B6M9 112 aa11.66□□□□□ -0.54
SFSWAP-209ENST00000540469 DCDC2BA2VCK2 349 aa11.66□□□□□ -0.54
SFSWAP-209ENST00000540469 SPINT1O43278 529 aa11.66□□□□□ -0.54
SFSWAP-209ENST00000540469 ITGA5P08648 1049 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms