RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 ZNF229Q9UJW7 825 aa7.73□□□□□ -1.17
CCDC90B-217ENST00000530253 CLEC4AQ9UMR7 237 aa7.73□□□□□ -1.17
CCDC90B-217ENST00000530253 MED31Q9Y3C7 131 aa7.73□□□□□ -1.17
CCDC90B-217ENST00000530253 FAM32AQ9Y421 112 aaKnown RBP7.73□□□□□ -1.17
CCDC90B-217ENST00000530253 POLQO75417 2590 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ARHGAP21Q5T5U3 1957 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 HTR3EA5X5Y0 456 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ERICH4A6NGS2 130 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 HSPB2A8KAH6 182 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 CDC42EP2O14613 210 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 TRAF3IP2O43734 574 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 TIPRLO75663 272 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 GADD45GO95257 159 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 CLDN1O95832 211 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 CH25HO95992 272 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 HPRP00739 348 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 CGAP01215 116 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 TMIGD3P0DMS9 266 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 IFI30P13284 250 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 FUT1P19526 365 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 CBLP22681 906 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 EDNRAP25101 427 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 AGTR1P30556 359 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 UQCRC1P31930 480 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 IST1P53990 364 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 LGALS4P56470 323 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 SMIM11AP58511 58 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 RPS4XP62701 263 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 FOXD4Q12950 439 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 PPP1R8Q12972 351 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 MFSD13AQ14CX5 517 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 RNPS1Q15287 305 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ATP6AP1Q15904 470 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 HSPB2Q16082 182 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 PGBD2Q6P3X8 592 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 VWA1Q6PCB0 445 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ZNF730Q6ZMV8 503 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 TMPRSS11FQ6ZWK6 438 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 H1FNTQ75WM6 255 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 P4HA3Q7Z4N8 544 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ZER1Q7Z7L7 766 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 EPHX4Q8IUS5 362 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 SLC43A2Q8N370 569 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ZIC4Q8N9L1 334 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 PIGXQ8TBF5 258 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 RND1Q92730 232 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 INTS12Q96CB8 462 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 SLC25A36Q96CQ1 311 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 BPIFA2Q96DR5 249 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 RAB3IPQ96QF0 476 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 SFXN3Q9BWM7 321 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 KLHL4Q9C0H6 718 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 NTN4Q9HB63 628 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 MRPL39Q9NYK5 338 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 JKAMPQ9P055 326 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 KLHL9Q9P2J3 617 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 PLEKHB1Q9UF11 243 aaPredicted RBP7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 B3GALT5Q9Y2C3 310 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 ADGRG4Q8IZF6 3080 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 DOCK7Q96N67 2140 aa7.72□□□□□ -1.17
CCDC90B-217ENST00000530253 PDZD2O15018 2839 aa7.71□□□□□ -1.17
CCDC90B-217ENST00000530253 MPDZO75970 2070 aa7.71□□□□□ -1.17
CCDC90B-217ENST00000530253 LOC102725191A0A1B0GVB3 256 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 ZNF724A8MTY0 619 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 MS4A18H0YCH9 400 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 TNFRSF11BO00300 401 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 PLPP3O14495 311 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 CLOCKO15516 846 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 ENTPD5O75356 428 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 KRT36O76013 467 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 VAMP5O95183 116 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 CST1P01037 141 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 ELANEP08246 267 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 HLA-DOBP13765 273 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 ZNF26P17031 533 aaPredicted RBP7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 AGAP20933 346 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 CHRNB4P30926 498 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 GPR4P46093 362 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 GSSP48637 474 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 PER3P56645 1201 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 FXYD6P3P58550 94 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 SIRPAP78324 504 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 RASGEF1BQ0VAM2 473 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 ZP4Q12836 540 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 GK3PQ14409 553 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 HMBOX1Q6NT76 420 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 PPP4R4Q6NUP7 873 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 C1orf94Q6P1W5 598 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 NUFIP2Q7Z417 695 aaKnown RBP7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 WDFY1Q8IWB7 410 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 TUSC5Q8IXB3 177 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 KDM8Q8N371 416 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 OR9K2Q8NGE7 335 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 OR9Q2Q8NGE9 314 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 OR13C2Q8NGS9 318 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 OR6K3Q8NGY3 331 aa7.71□□□□□ -1.18
CCDC90B-217ENST00000530253 OR5J2Q8NH18 312 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms